Protein–RNA interactions for Protein: Q8IY92

SLX4, Structure-specific endonuclease subunit SLX4, humanhuman

Predictions only

Length 1,834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4Q8IY92 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC22.64■■□□□ 1.22
SLX4Q8IY92 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
SLX4Q8IY92 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
SLX4Q8IY92 LINC01006-201ENST00000333319 2292 ntBASIC22.64■■□□□ 1.21
SLX4Q8IY92 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
SLX4Q8IY92 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC22.64■■□□□ 1.21
SLX4Q8IY92 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC22.64■■□□□ 1.21
SLX4Q8IY92 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
SLX4Q8IY92 CSF3-203ENST00000394148 622 ntTSL 3 BASIC22.64■■□□□ 1.21
SLX4Q8IY92 MIR940-201ENST00000401276 94 ntBASIC22.64■■□□□ 1.21
SLX4Q8IY92 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC22.64■■□□□ 1.21
SLX4Q8IY92 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC22.64■■□□□ 1.21
SLX4Q8IY92 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC22.64■■□□□ 1.21
SLX4Q8IY92 AP001269.4-201ENST00000609611 512 ntBASIC22.64■■□□□ 1.21
SLX4Q8IY92 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC22.64■■□□□ 1.21
SLX4Q8IY92 AC116407.3-201ENST00000623905 1129 ntBASIC22.64■■□□□ 1.21
SLX4Q8IY92 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC22.63■■□□□ 1.21
SLX4Q8IY92 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
SLX4Q8IY92 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC22.63■■□□□ 1.21
SLX4Q8IY92 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
SLX4Q8IY92 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC22.63■■□□□ 1.21
SLX4Q8IY92 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
SLX4Q8IY92 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC22.63■■□□□ 1.21
SLX4Q8IY92 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
SLX4Q8IY92 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC22.63■■□□□ 1.21
SLX4Q8IY92 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
SLX4Q8IY92 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
SLX4Q8IY92 AC132008.2-207ENST00000454517 770 ntBASIC22.63■■□□□ 1.21
SLX4Q8IY92 AC113404.2-201ENST00000507884 177 ntBASIC22.63■■□□□ 1.21
SLX4Q8IY92 KRT18P41-201ENST00000518924 1277 ntBASIC22.63■■□□□ 1.21
SLX4Q8IY92 AC034105.1-201ENST00000563488 319 ntBASIC22.63■■□□□ 1.21
SLX4Q8IY92 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC22.63■■□□□ 1.21
SLX4Q8IY92 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC22.63■■□□□ 1.21
SLX4Q8IY92 AC125437.2-201ENST00000625180 2167 ntBASIC22.63■■□□□ 1.21
SLX4Q8IY92 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
SLX4Q8IY92 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC22.62■■□□□ 1.21
SLX4Q8IY92 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
SLX4Q8IY92 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC22.62■■□□□ 1.21
SLX4Q8IY92 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
SLX4Q8IY92 MTDHP3-201ENST00000594186 672 ntBASIC22.62■■□□□ 1.21
SLX4Q8IY92 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
SLX4Q8IY92 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC22.62■■□□□ 1.21
SLX4Q8IY92 FAM215A-202ENST00000632077 792 ntBASIC22.62■■□□□ 1.21
SLX4Q8IY92 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC22.62■■□□□ 1.21
SLX4Q8IY92 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
SLX4Q8IY92 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
SLX4Q8IY92 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
SLX4Q8IY92 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC22.61■■□□□ 1.21
SLX4Q8IY92 AC012640.2-201ENST00000561606 901 ntBASIC22.61■■□□□ 1.21
SLX4Q8IY92 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC22.61■■□□□ 1.21
SLX4Q8IY92 FP475955.4-201ENST00000623131 1990 ntBASIC22.61■■□□□ 1.21
SLX4Q8IY92 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
SLX4Q8IY92 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC22.61■■□□□ 1.21
SLX4Q8IY92 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
SLX4Q8IY92 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
SLX4Q8IY92 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
SLX4Q8IY92 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC22.61■■□□□ 1.21
SLX4Q8IY92 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
SLX4Q8IY92 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
SLX4Q8IY92 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
SLX4Q8IY92 RBM17P3-201ENST00000417687 1192 ntBASIC22.61■■□□□ 1.21
SLX4Q8IY92 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
SLX4Q8IY92 SART3-203ENST00000546611 1184 ntBASIC22.61■■□□□ 1.21
SLX4Q8IY92 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC22.61■■□□□ 1.21
SLX4Q8IY92 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC22.61■■□□□ 1.21
SLX4Q8IY92 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
SLX4Q8IY92 HEIH-201ENST00000623091 1652 ntBASIC22.61■■□□□ 1.21
SLX4Q8IY92 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
SLX4Q8IY92 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC22.61■■□□□ 1.21
SLX4Q8IY92 AL157384.1-201ENST00000445995 2473 ntBASIC22.61■■□□□ 1.21
SLX4Q8IY92 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC22.6■■□□□ 1.21
SLX4Q8IY92 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC22.6■■□□□ 1.21
SLX4Q8IY92 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC22.6■■□□□ 1.21
SLX4Q8IY92 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
SLX4Q8IY92 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
SLX4Q8IY92 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
SLX4Q8IY92 RCN1P2-201ENST00000398357 915 ntBASIC22.6■■□□□ 1.21
SLX4Q8IY92 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC22.6■■□□□ 1.21
SLX4Q8IY92 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC22.6■■□□□ 1.21
SLX4Q8IY92 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC22.6■■□□□ 1.21
SLX4Q8IY92 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC22.6■■□□□ 1.21
SLX4Q8IY92 ANKRD20A8P-203ENST00000641373 517 ntBASIC22.6■■□□□ 1.21
SLX4Q8IY92 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC22.6■■□□□ 1.21
SLX4Q8IY92 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC22.6■■□□□ 1.21
SLX4Q8IY92 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
SLX4Q8IY92 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
SLX4Q8IY92 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC22.6■■□□□ 1.21
SLX4Q8IY92 ZNF259P1-201ENST00000407656 1365 ntBASIC22.6■■□□□ 1.21
SLX4Q8IY92 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC22.59■■□□□ 1.21
SLX4Q8IY92 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC22.59■■□□□ 1.21
SLX4Q8IY92 AL138831.2-201ENST00000606564 490 ntBASIC22.59■■□□□ 1.21
SLX4Q8IY92 AL139424.1-201ENST00000607572 797 ntBASIC22.59■■□□□ 1.21
SLX4Q8IY92 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
SLX4Q8IY92 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC22.59■■□□□ 1.21
SLX4Q8IY92 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
SLX4Q8IY92 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
SLX4Q8IY92 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC22.59■■□□□ 1.21
SLX4Q8IY92 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC22.59■■□□□ 1.21
SLX4Q8IY92 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC22.59■■□□□ 1.21
SLX4Q8IY92 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms