Protein–RNA interactions for Protein: Q8CI96

Clip4, CAP-Gly domain-containing linker protein 4, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip4Q8CI96 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Clip4Q8CI96 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Clip4Q8CI96 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Clip4Q8CI96 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Clip4Q8CI96 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Clip4Q8CI96 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Clip4Q8CI96 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Clip4Q8CI96 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Clip4Q8CI96 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Clip4Q8CI96 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Clip4Q8CI96 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Clip4Q8CI96 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Clip4Q8CI96 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Clip4Q8CI96 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Clip4Q8CI96 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Clip4Q8CI96 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Clip4Q8CI96 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Clip4Q8CI96 Gm44616-201ENSMUST00000206417 1732 ntBASIC15.89■□□□□ 0.13
Clip4Q8CI96 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC15.89■□□□□ 0.13
Clip4Q8CI96 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
Clip4Q8CI96 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Clip4Q8CI96 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Clip4Q8CI96 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Clip4Q8CI96 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Clip4Q8CI96 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Clip4Q8CI96 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Clip4Q8CI96 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Clip4Q8CI96 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Clip4Q8CI96 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Clip4Q8CI96 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Clip4Q8CI96 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Clip4Q8CI96 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Clip4Q8CI96 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Clip4Q8CI96 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC15.89■□□□□ 0.13
Clip4Q8CI96 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Clip4Q8CI96 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Clip4Q8CI96 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Clip4Q8CI96 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC15.88■□□□□ 0.13
Clip4Q8CI96 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC15.88■□□□□ 0.13
Clip4Q8CI96 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Clip4Q8CI96 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC15.88■□□□□ 0.13
Clip4Q8CI96 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Clip4Q8CI96 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Clip4Q8CI96 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Clip4Q8CI96 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Clip4Q8CI96 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Clip4Q8CI96 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Clip4Q8CI96 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Clip4Q8CI96 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Clip4Q8CI96 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Clip4Q8CI96 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Clip4Q8CI96 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
Clip4Q8CI96 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Clip4Q8CI96 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Clip4Q8CI96 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC15.88■□□□□ 0.13
Clip4Q8CI96 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC15.88■□□□□ 0.13
Clip4Q8CI96 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC15.88■□□□□ 0.13
Clip4Q8CI96 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC15.88■□□□□ 0.13
Clip4Q8CI96 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC15.88■□□□□ 0.13
Clip4Q8CI96 AC159205.3-201ENSMUST00000224614 874 ntBASIC15.88■□□□□ 0.13
Clip4Q8CI96 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Clip4Q8CI96 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Clip4Q8CI96 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Clip4Q8CI96 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC15.88■□□□□ 0.13
Clip4Q8CI96 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC15.88■□□□□ 0.13
Clip4Q8CI96 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Clip4Q8CI96 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Clip4Q8CI96 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Clip4Q8CI96 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC15.88■□□□□ 0.13
Clip4Q8CI96 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC15.88■□□□□ 0.13
Clip4Q8CI96 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Clip4Q8CI96 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Clip4Q8CI96 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC15.87■□□□□ 0.13
Clip4Q8CI96 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Clip4Q8CI96 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Clip4Q8CI96 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Clip4Q8CI96 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Clip4Q8CI96 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Clip4Q8CI96 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Clip4Q8CI96 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Clip4Q8CI96 Gm10052-201ENSMUST00000168019 960 ntBASIC15.87■□□□□ 0.13
Clip4Q8CI96 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Clip4Q8CI96 Gm7729-201ENSMUST00000050143 801 ntBASIC15.87■□□□□ 0.13
Clip4Q8CI96 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC15.87■□□□□ 0.13
Clip4Q8CI96 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC15.87■□□□□ 0.13
Clip4Q8CI96 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Clip4Q8CI96 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC15.87■□□□□ 0.13
Clip4Q8CI96 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Clip4Q8CI96 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Clip4Q8CI96 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Clip4Q8CI96 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Clip4Q8CI96 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Clip4Q8CI96 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Clip4Q8CI96 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Clip4Q8CI96 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Clip4Q8CI96 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Clip4Q8CI96 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Clip4Q8CI96 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Clip4Q8CI96 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Clip4Q8CI96 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms