Protein–RNA interactions for Protein: P81269

Atf1, Cyclic AMP-dependent transcription factor ATF-1, mousemouse

Known RBP Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf1P81269 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC13.64□□□□□ -0.23
Atf1P81269 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Atf1P81269 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Atf1P81269 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Atf1P81269 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Atf1P81269 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Atf1P81269 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Atf1P81269 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Atf1P81269 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Atf1P81269 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Atf1P81269 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Atf1P81269 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Atf1P81269 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Atf1P81269 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Atf1P81269 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Atf1P81269 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Atf1P81269 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Atf1P81269 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Atf1P81269 Gm23634-201ENSMUST00000175071 91 ntBASIC13.63□□□□□ -0.23
Atf1P81269 Ighv6-1-201ENSMUST00000193612 343 ntBASIC13.63□□□□□ -0.23
Atf1P81269 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Atf1P81269 AC130713.1-201ENSMUST00000228853 1096 ntBASIC13.63□□□□□ -0.23
Atf1P81269 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Atf1P81269 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Atf1P81269 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Atf1P81269 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC13.63□□□□□ -0.23
Atf1P81269 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
Atf1P81269 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Atf1P81269 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Atf1P81269 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Atf1P81269 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Atf1P81269 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Atf1P81269 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Atf1P81269 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Atf1P81269 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Atf1P81269 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Atf1P81269 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Atf1P81269 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Atf1P81269 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Atf1P81269 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC13.62□□□□□ -0.23
Atf1P81269 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Atf1P81269 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Atf1P81269 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Atf1P81269 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC13.62□□□□□ -0.23
Atf1P81269 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Atf1P81269 Gm15794-201ENSMUST00000120182 631 ntBASIC13.62□□□□□ -0.23
Atf1P81269 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC13.62□□□□□ -0.23
Atf1P81269 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC13.62□□□□□ -0.23
Atf1P81269 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC13.62□□□□□ -0.23
Atf1P81269 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Atf1P81269 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Atf1P81269 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Atf1P81269 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Atf1P81269 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
Atf1P81269 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Atf1P81269 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Atf1P81269 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Atf1P81269 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Atf1P81269 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC13.62□□□□□ -0.23
Atf1P81269 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Atf1P81269 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Atf1P81269 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Atf1P81269 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC13.62□□□□□ -0.23
Atf1P81269 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Atf1P81269 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Atf1P81269 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC13.61□□□□□ -0.23
Atf1P81269 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
Atf1P81269 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Atf1P81269 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Atf1P81269 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Atf1P81269 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Atf1P81269 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Atf1P81269 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Atf1P81269 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Atf1P81269 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC13.61□□□□□ -0.23
Atf1P81269 Gm6728-201ENSMUST00000178117 1065 ntBASIC13.61□□□□□ -0.23
Atf1P81269 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Atf1P81269 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Atf1P81269 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Atf1P81269 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Atf1P81269 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Atf1P81269 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Atf1P81269 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Atf1P81269 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Atf1P81269 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Atf1P81269 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Atf1P81269 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Atf1P81269 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Atf1P81269 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Atf1P81269 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Atf1P81269 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Atf1P81269 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Atf1P81269 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Atf1P81269 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Atf1P81269 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Atf1P81269 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Atf1P81269 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Atf1P81269 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Atf1P81269 Gm13312-201ENSMUST00000119631 718 ntBASIC13.6□□□□□ -0.23
Atf1P81269 AA414768-201ENSMUST00000121924 1257 ntBASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 58.4 ms