Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Sox18P43680 Nrn1-204ENSMUST00000224323 1779 ntBASIC15.05■□□□□ -0
Sox18P43680 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Sox18P43680 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Sox18P43680 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Sox18P43680 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Sox18P43680 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Sox18P43680 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Sox18P43680 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Sox18P43680 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Sox18P43680 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Sox18P43680 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Sox18P43680 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Sox18P43680 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Sox18P43680 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Sox18P43680 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Sox18P43680 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Sox18P43680 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Sox18P43680 Gm15427-201ENSMUST00000117288 531 ntBASIC15.04■□□□□ -0
Sox18P43680 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC15.04■□□□□ -0
Sox18P43680 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC15.04■□□□□ -0
Sox18P43680 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC15.04■□□□□ -0
Sox18P43680 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC15.04■□□□□ -0
Sox18P43680 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Sox18P43680 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC15.04■□□□□ -0
Sox18P43680 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Sox18P43680 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Sox18P43680 AC140397.2-201ENSMUST00000224213 834 ntBASIC15.04■□□□□ -0
Sox18P43680 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC15.04■□□□□ -0
Sox18P43680 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Sox18P43680 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Sox18P43680 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Sox18P43680 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Sox18P43680 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Sox18P43680 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Sox18P43680 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Sox18P43680 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC15.04■□□□□ -0
Sox18P43680 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC15.04■□□□□ -0
Sox18P43680 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Sox18P43680 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Sox18P43680 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Sox18P43680 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC15.03■□□□□ -0
Sox18P43680 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Sox18P43680 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC15.03■□□□□ -0
Sox18P43680 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Sox18P43680 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Sox18P43680 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC15.03■□□□□ -0
Sox18P43680 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC15.03■□□□□ -0
Sox18P43680 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC15.03■□□□□ -0
Sox18P43680 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Sox18P43680 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Sox18P43680 Mir7036b-201ENSMUST00000184791 63 ntBASIC15.03■□□□□ -0
Sox18P43680 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC15.03■□□□□ -0
Sox18P43680 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Sox18P43680 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Sox18P43680 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Sox18P43680 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Sox18P43680 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Sox18P43680 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Sox18P43680 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC15.03■□□□□ -0
Sox18P43680 Slc35b2-202ENSMUST00000223987 1766 ntBASIC15.03■□□□□ -0
Sox18P43680 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Sox18P43680 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Sox18P43680 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC15.02■□□□□ -0
Sox18P43680 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Sox18P43680 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC15.02■□□□□ -0
Sox18P43680 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Sox18P43680 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC15.02■□□□□ -0
Sox18P43680 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC15.02■□□□□ -0
Sox18P43680 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Sox18P43680 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC15.02■□□□□ -0
Sox18P43680 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Sox18P43680 Gm36858-201ENSMUST00000194501 2391 ntBASIC15.02■□□□□ -0
Sox18P43680 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC15.02■□□□□ -0
Sox18P43680 Gm13597-201ENSMUST00000121239 375 ntBASIC15.02■□□□□ -0
Sox18P43680 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Sox18P43680 Mir6990-201ENSMUST00000183724 91 ntBASIC15.02■□□□□ -0
Sox18P43680 Gm43474-201ENSMUST00000196415 774 ntBASIC15.02■□□□□ -0
Sox18P43680 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC15.02■□□□□ -0
Sox18P43680 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC15.02■□□□□ -0
Sox18P43680 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC15.02■□□□□ -0
Sox18P43680 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Sox18P43680 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC15.02■□□□□ -0
Sox18P43680 AC124732.2-201ENSMUST00000221977 316 ntBASIC15.02■□□□□ -0
Sox18P43680 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC15.02■□□□□ -0
Sox18P43680 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC15.02■□□□□ -0
Sox18P43680 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC15.02■□□□□ -0
Sox18P43680 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC15.02□□□□□ -0.01
Sox18P43680 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC15.02□□□□□ -0.01
Sox18P43680 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Sox18P43680 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Sox18P43680 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Sox18P43680 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Sox18P43680 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
Sox18P43680 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sox18P43680 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sox18P43680 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sox18P43680 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sox18P43680 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sox18P43680 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms