Protein–RNA interactions for Protein: P10146

Ccl1, C-C motif chemokine 1, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl1P10146 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccl1P10146 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccl1P10146 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccl1P10146 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccl1P10146 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ccl1P10146 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Ccl1P10146 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ccl1P10146 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Ccl1P10146 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Ccl1P10146 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ccl1P10146 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC12.27□□□□□ -0.45
Ccl1P10146 Gm7638-201ENSMUST00000121348 967 ntBASIC12.27□□□□□ -0.45
Ccl1P10146 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Ccl1P10146 Gm26571-201ENSMUST00000181399 666 ntBASIC12.27□□□□□ -0.45
Ccl1P10146 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Ccl1P10146 Gm43183-201ENSMUST00000200632 547 ntBASIC12.27□□□□□ -0.45
Ccl1P10146 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ccl1P10146 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ccl1P10146 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ccl1P10146 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Ccl1P10146 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC12.27□□□□□ -0.45
Ccl1P10146 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Ccl1P10146 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Ccl1P10146 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ccl1P10146 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Ccl1P10146 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ccl1P10146 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ccl1P10146 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ccl1P10146 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ccl1P10146 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ccl1P10146 AC148324.1-201ENSMUST00000219034 4240 ntBASIC12.27□□□□□ -0.45
Ccl1P10146 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ccl1P10146 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ccl1P10146 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC12.27□□□□□ -0.45
Ccl1P10146 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Ccl1P10146 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC12.27□□□□□ -0.45
Ccl1P10146 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC12.27□□□□□ -0.45
Ccl1P10146 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ccl1P10146 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Ccl1P10146 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Ccl1P10146 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC12.26□□□□□ -0.45
Ccl1P10146 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccl1P10146 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccl1P10146 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccl1P10146 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC12.26□□□□□ -0.45
Ccl1P10146 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccl1P10146 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ccl1P10146 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccl1P10146 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccl1P10146 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccl1P10146 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccl1P10146 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccl1P10146 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccl1P10146 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Ccl1P10146 Gm42569-201ENSMUST00000200539 472 ntBASIC12.26□□□□□ -0.45
Ccl1P10146 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccl1P10146 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Ccl1P10146 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccl1P10146 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Ccl1P10146 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccl1P10146 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Ccl1P10146 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccl1P10146 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccl1P10146 Tfap2a-203ENSMUST00000223869 2037 ntBASIC12.26□□□□□ -0.45
Ccl1P10146 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC12.26□□□□□ -0.45
Ccl1P10146 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ccl1P10146 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC12.26□□□□□ -0.45
Ccl1P10146 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccl1P10146 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccl1P10146 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccl1P10146 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccl1P10146 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC12.25□□□□□ -0.45
Ccl1P10146 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccl1P10146 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccl1P10146 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccl1P10146 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccl1P10146 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccl1P10146 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccl1P10146 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccl1P10146 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ccl1P10146 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccl1P10146 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ccl1P10146 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccl1P10146 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccl1P10146 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ccl1P10146 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccl1P10146 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC12.25□□□□□ -0.45
Ccl1P10146 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC12.25□□□□□ -0.45
Ccl1P10146 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Ccl1P10146 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC12.25□□□□□ -0.45
Ccl1P10146 Pcgf5-211ENSMUST00000225920 6443 ntBASIC12.25□□□□□ -0.45
Ccl1P10146 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccl1P10146 Gm6190-201ENSMUST00000220683 1374 ntBASIC12.25□□□□□ -0.45
Ccl1P10146 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccl1P10146 Gm43859-201ENSMUST00000200075 1412 ntBASIC12.25□□□□□ -0.45
Ccl1P10146 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccl1P10146 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Ccl1P10146 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC12.25□□□□□ -0.45
Ccl1P10146 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC12.25□□□□□ -0.45
Ccl1P10146 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC12.25□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms