Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
CHD2O14647 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC25.86■■□□□ 1.73
CHD2O14647 AC004967.1-201ENST00000453589 447 ntBASIC25.86■■□□□ 1.73
CHD2O14647 RNA5SP415-201ENST00000517246 115 ntBASIC25.86■■□□□ 1.73
CHD2O14647 AC040169.1-201ENST00000565382 521 ntBASIC25.86■■□□□ 1.73
CHD2O14647 AC008735.5-201ENST00000623544 497 ntBASIC25.86■■□□□ 1.73
CHD2O14647 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC25.86■■□□□ 1.73
CHD2O14647 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
CHD2O14647 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC25.86■■□□□ 1.73
CHD2O14647 PALM-208ENST00000592155 2272 ntTSL 4 BASIC25.86■■□□□ 1.73
CHD2O14647 MTMR9LP-203ENST00000426597 1545 ntBASIC25.86■■□□□ 1.73
CHD2O14647 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC25.86■■□□□ 1.73
CHD2O14647 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC25.86■■□□□ 1.73
CHD2O14647 DHDH-204ENST00000523250 634 ntTSL 5 BASIC25.86■■□□□ 1.73
CHD2O14647 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC25.86■■□□□ 1.73
CHD2O14647 OR7E14P-202ENST00000530490 1290 ntBASIC25.86■■□□□ 1.73
CHD2O14647 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC25.86■■□□□ 1.73
CHD2O14647 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC25.86■■□□□ 1.73
CHD2O14647 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC25.85■■□□□ 1.73
CHD2O14647 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC25.85■■□□□ 1.73
CHD2O14647 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC25.85■■□□□ 1.73
CHD2O14647 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
CHD2O14647 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC25.85■■□□□ 1.73
CHD2O14647 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
CHD2O14647 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
CHD2O14647 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
CHD2O14647 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC25.85■■□□□ 1.73
CHD2O14647 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC25.85■■□□□ 1.73
CHD2O14647 IMP4-203ENST00000409935 958 ntTSL 5 BASIC25.85■■□□□ 1.73
CHD2O14647 DNAJB3-202ENST00000449667 1266 ntBASIC25.85■■□□□ 1.73
CHD2O14647 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC25.85■■□□□ 1.73
CHD2O14647 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC25.85■■□□□ 1.73
CHD2O14647 UBQLN4P1-201ENST00000461599 1801 ntBASIC25.85■■□□□ 1.73
CHD2O14647 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC25.85■■□□□ 1.73
CHD2O14647 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC25.85■■□□□ 1.73
CHD2O14647 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
CHD2O14647 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
CHD2O14647 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC25.85■■□□□ 1.73
CHD2O14647 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
CHD2O14647 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC25.85■■□□□ 1.73
CHD2O14647 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC25.84■■□□□ 1.73
CHD2O14647 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC25.84■■□□□ 1.73
CHD2O14647 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
CHD2O14647 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC25.84■■□□□ 1.73
CHD2O14647 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
CHD2O14647 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC25.84■■□□□ 1.73
CHD2O14647 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC25.84■■□□□ 1.73
CHD2O14647 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
CHD2O14647 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC25.84■■□□□ 1.73
CHD2O14647 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
CHD2O14647 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC25.84■■□□□ 1.73
CHD2O14647 PNMT-203ENST00000581428 677 ntTSL 2 BASIC25.84■■□□□ 1.73
CHD2O14647 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC25.84■■□□□ 1.73
CHD2O14647 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC25.84■■□□□ 1.73
CHD2O14647 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
CHD2O14647 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
CHD2O14647 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
CHD2O14647 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC25.83■■□□□ 1.73
CHD2O14647 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
CHD2O14647 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
CHD2O14647 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC25.83■■□□□ 1.73
CHD2O14647 AC092910.1-201ENST00000482027 1129 ntBASIC25.83■■□□□ 1.73
CHD2O14647 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC25.83■■□□□ 1.73
CHD2O14647 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.72
CHD2O14647 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC25.83■■□□□ 1.72
CHD2O14647 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC25.82■■□□□ 1.72
CHD2O14647 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC25.82■■□□□ 1.72
CHD2O14647 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC25.82■■□□□ 1.72
CHD2O14647 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
CHD2O14647 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
CHD2O14647 RPS8P6-201ENST00000426177 609 ntBASIC25.82■■□□□ 1.72
CHD2O14647 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC25.82■■□□□ 1.72
CHD2O14647 CYGB-205ENST00000590175 830 ntTSL 3 BASIC25.82■■□□□ 1.72
CHD2O14647 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC25.82■■□□□ 1.72
CHD2O14647 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC25.82■■□□□ 1.72
CHD2O14647 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
CHD2O14647 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC25.82■■□□□ 1.72
CHD2O14647 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
CHD2O14647 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
CHD2O14647 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC25.81■■□□□ 1.72
CHD2O14647 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC25.81■■□□□ 1.72
CHD2O14647 RBSN-204ENST00000449050 903 ntTSL 2 BASIC25.81■■□□□ 1.72
CHD2O14647 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC25.81■■□□□ 1.72
CHD2O14647 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
CHD2O14647 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
CHD2O14647 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
CHD2O14647 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC25.81■■□□□ 1.72
CHD2O14647 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC25.81■■□□□ 1.72
CHD2O14647 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
CHD2O14647 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
CHD2O14647 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
CHD2O14647 ABCD1P5-201ENST00000445663 754 ntBASIC25.81■■□□□ 1.72
CHD2O14647 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
CHD2O14647 AC025062.2-201ENST00000605477 670 ntBASIC25.81■■□□□ 1.72
CHD2O14647 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC25.81■■□□□ 1.72
CHD2O14647 AL139288.1-201ENST00000623748 933 ntBASIC25.81■■□□□ 1.72
CHD2O14647 NARF-204ENST00000390006 1766 ntTSL 2 BASIC25.8■■□□□ 1.72
CHD2O14647 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC25.8■■□□□ 1.72
CHD2O14647 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
CHD2O14647 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms