Protein–RNA interactions for Protein: O08740

Polr2j, DNA-directed RNA polymerase II subunit RPB11, mousemouse

Known RBP Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr2jO08740 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Polr2jO08740 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Polr2jO08740 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Polr2jO08740 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC15.13■□□□□ 0.01
Polr2jO08740 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC15.13■□□□□ 0.01
Polr2jO08740 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC15.13■□□□□ 0.01
Polr2jO08740 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Polr2jO08740 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Polr2jO08740 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Polr2jO08740 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Polr2jO08740 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Polr2jO08740 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
Polr2jO08740 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Polr2jO08740 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
Polr2jO08740 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Polr2jO08740 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Polr2jO08740 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Polr2jO08740 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Polr2jO08740 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC15.13■□□□□ 0.01
Polr2jO08740 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Polr2jO08740 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Polr2jO08740 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Polr2jO08740 Tfap2a-203ENSMUST00000223869 2037 ntBASIC15.12■□□□□ 0.01
Polr2jO08740 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Polr2jO08740 BC037039-201ENSMUST00000192003 2205 ntBASIC15.12■□□□□ 0.01
Polr2jO08740 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC15.12■□□□□ 0.01
Polr2jO08740 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Polr2jO08740 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Polr2jO08740 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Polr2jO08740 Gm29340-201ENSMUST00000188763 3854 ntBASIC15.12■□□□□ 0.01
Polr2jO08740 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Polr2jO08740 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Polr2jO08740 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC15.12■□□□□ 0.01
Polr2jO08740 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Polr2jO08740 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC15.12■□□□□ 0.01
Polr2jO08740 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Polr2jO08740 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Polr2jO08740 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC15.12■□□□□ 0.01
Polr2jO08740 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
Polr2jO08740 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC15.12■□□□□ 0.01
Polr2jO08740 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Polr2jO08740 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Polr2jO08740 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Polr2jO08740 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Polr2jO08740 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Polr2jO08740 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Polr2jO08740 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Polr2jO08740 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Polr2jO08740 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC15.11■□□□□ 0.01
Polr2jO08740 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Polr2jO08740 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Polr2jO08740 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC15.11■□□□□ 0.01
Polr2jO08740 Gm21559-201ENSMUST00000220638 855 ntBASIC15.11■□□□□ 0.01
Polr2jO08740 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Polr2jO08740 Gm8587-201ENSMUST00000076538 843 ntBASIC15.11■□□□□ 0.01
Polr2jO08740 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Polr2jO08740 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Polr2jO08740 Gm44443-201ENSMUST00000204396 5633 ntBASIC15.11■□□□□ 0.01
Polr2jO08740 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Polr2jO08740 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Polr2jO08740 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Polr2jO08740 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Polr2jO08740 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC15.11■□□□□ 0.01
Polr2jO08740 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Polr2jO08740 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Polr2jO08740 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Polr2jO08740 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Polr2jO08740 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Polr2jO08740 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Polr2jO08740 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Polr2jO08740 Gm10584-201ENSMUST00000207036 2628 ntBASIC15.1■□□□□ 0.01
Polr2jO08740 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Polr2jO08740 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC15.1■□□□□ 0.01
Polr2jO08740 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC15.1■□□□□ 0.01
Polr2jO08740 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Polr2jO08740 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Polr2jO08740 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Polr2jO08740 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Polr2jO08740 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Polr2jO08740 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Polr2jO08740 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Polr2jO08740 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Polr2jO08740 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Polr2jO08740 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Polr2jO08740 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
Polr2jO08740 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC15.1■□□□□ 0.01
Polr2jO08740 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Polr2jO08740 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Polr2jO08740 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Polr2jO08740 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC15.09■□□□□ 0.01
Polr2jO08740 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC15.09■□□□□ 0.01
Polr2jO08740 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Polr2jO08740 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Polr2jO08740 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Polr2jO08740 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Polr2jO08740 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Polr2jO08740 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Polr2jO08740 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Polr2jO08740 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC15.09■□□□□ 0.01
Polr2jO08740 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms