Protein–RNA interactions for Protein: D3Z4R4

Nkx6-2, NK6 homeobox 2, mousemouse

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-2D3Z4R4 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nkx6-2D3Z4R4 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nkx6-2D3Z4R4 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nkx6-2D3Z4R4 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Nkx6-2D3Z4R4 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
Nkx6-2D3Z4R4 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nkx6-2D3Z4R4 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nkx6-2D3Z4R4 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nkx6-2D3Z4R4 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nkx6-2D3Z4R4 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nkx6-2D3Z4R4 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nkx6-2D3Z4R4 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nkx6-2D3Z4R4 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nkx6-2D3Z4R4 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nkx6-2D3Z4R4 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nkx6-2D3Z4R4 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
Nkx6-2D3Z4R4 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nkx6-2D3Z4R4 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Nkx6-2D3Z4R4 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Nkx6-2D3Z4R4 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC12.86□□□□□ -0.35
Nkx6-2D3Z4R4 Gm43017-201ENSMUST00000198296 752 ntBASIC12.86□□□□□ -0.35
Nkx6-2D3Z4R4 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nkx6-2D3Z4R4 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC12.86□□□□□ -0.35
Nkx6-2D3Z4R4 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Nkx6-2D3Z4R4 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC12.86□□□□□ -0.35
Nkx6-2D3Z4R4 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Nkx6-2D3Z4R4 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nkx6-2D3Z4R4 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nkx6-2D3Z4R4 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nkx6-2D3Z4R4 Gm37297-201ENSMUST00000192974 2384 ntBASIC12.86□□□□□ -0.35
Nkx6-2D3Z4R4 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nkx6-2D3Z4R4 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nkx6-2D3Z4R4 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Nkx6-2D3Z4R4 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nkx6-2D3Z4R4 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nkx6-2D3Z4R4 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nkx6-2D3Z4R4 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nkx6-2D3Z4R4 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nkx6-2D3Z4R4 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Nkx6-2D3Z4R4 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nkx6-2D3Z4R4 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nkx6-2D3Z4R4 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC12.85□□□□□ -0.35
Nkx6-2D3Z4R4 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nkx6-2D3Z4R4 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Nkx6-2D3Z4R4 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nkx6-2D3Z4R4 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC12.85□□□□□ -0.35
Nkx6-2D3Z4R4 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nkx6-2D3Z4R4 AC121805.2-201ENSMUST00000218808 2538 ntBASIC12.85□□□□□ -0.35
Nkx6-2D3Z4R4 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC12.85□□□□□ -0.35
Nkx6-2D3Z4R4 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC12.85□□□□□ -0.35
Nkx6-2D3Z4R4 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nkx6-2D3Z4R4 Gm21956-201ENSMUST00000179946 522 ntBASIC12.85□□□□□ -0.35
Nkx6-2D3Z4R4 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC12.85□□□□□ -0.35
Nkx6-2D3Z4R4 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nkx6-2D3Z4R4 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nkx6-2D3Z4R4 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Nkx6-2D3Z4R4 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nkx6-2D3Z4R4 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nkx6-2D3Z4R4 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Nkx6-2D3Z4R4 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Nkx6-2D3Z4R4 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nkx6-2D3Z4R4 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
Nkx6-2D3Z4R4 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Nkx6-2D3Z4R4 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nkx6-2D3Z4R4 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nkx6-2D3Z4R4 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Nkx6-2D3Z4R4 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Nkx6-2D3Z4R4 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nkx6-2D3Z4R4 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nkx6-2D3Z4R4 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nkx6-2D3Z4R4 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nkx6-2D3Z4R4 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC12.84□□□□□ -0.35
Nkx6-2D3Z4R4 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nkx6-2D3Z4R4 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC12.84□□□□□ -0.35
Nkx6-2D3Z4R4 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nkx6-2D3Z4R4 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC12.84□□□□□ -0.35
Nkx6-2D3Z4R4 Gm27454-201ENSMUST00000185090 204 ntBASIC12.84□□□□□ -0.35
Nkx6-2D3Z4R4 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
Nkx6-2D3Z4R4 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC12.84□□□□□ -0.35
Nkx6-2D3Z4R4 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Nkx6-2D3Z4R4 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Nkx6-2D3Z4R4 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nkx6-2D3Z4R4 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Nkx6-2D3Z4R4 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nkx6-2D3Z4R4 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC12.84□□□□□ -0.35
Nkx6-2D3Z4R4 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nkx6-2D3Z4R4 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Nkx6-2D3Z4R4 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC12.84□□□□□ -0.35
Nkx6-2D3Z4R4 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nkx6-2D3Z4R4 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nkx6-2D3Z4R4 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Nkx6-2D3Z4R4 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Nkx6-2D3Z4R4 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.35
Nkx6-2D3Z4R4 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.35
Nkx6-2D3Z4R4 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Nkx6-2D3Z4R4 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Nkx6-2D3Z4R4 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nkx6-2D3Z4R4 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nkx6-2D3Z4R4 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nkx6-2D3Z4R4 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms