Protein–RNA interactions for Protein: A0A0B4J1K1

Trav4-3, T cell receptor alpha variable 4-3 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-3A0A0B4J1K1 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav4-3A0A0B4J1K1 Dio3-201ENSMUST00000097228 1449 ntBASIC10.76□□□□□ -0.69
Trav4-3A0A0B4J1K1 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC10.76□□□□□ -0.69
Trav4-3A0A0B4J1K1 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Trav4-3A0A0B4J1K1 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav4-3A0A0B4J1K1 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav4-3A0A0B4J1K1 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav4-3A0A0B4J1K1 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav4-3A0A0B4J1K1 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC10.76□□□□□ -0.69
Trav4-3A0A0B4J1K1 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav4-3A0A0B4J1K1 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Trav4-3A0A0B4J1K1 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Trav4-3A0A0B4J1K1 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC10.76□□□□□ -0.69
Trav4-3A0A0B4J1K1 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Trav4-3A0A0B4J1K1 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav4-3A0A0B4J1K1 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Trav4-3A0A0B4J1K1 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC10.76□□□□□ -0.69
Trav4-3A0A0B4J1K1 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav4-3A0A0B4J1K1 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav4-3A0A0B4J1K1 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Trav4-3A0A0B4J1K1 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav4-3A0A0B4J1K1 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav4-3A0A0B4J1K1 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC10.76□□□□□ -0.69
Trav4-3A0A0B4J1K1 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav4-3A0A0B4J1K1 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC10.76□□□□□ -0.69
Trav4-3A0A0B4J1K1 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC10.76□□□□□ -0.69
Trav4-3A0A0B4J1K1 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Trav4-3A0A0B4J1K1 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav4-3A0A0B4J1K1 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav4-3A0A0B4J1K1 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav4-3A0A0B4J1K1 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav4-3A0A0B4J1K1 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav4-3A0A0B4J1K1 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Trav4-3A0A0B4J1K1 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav4-3A0A0B4J1K1 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Trav4-3A0A0B4J1K1 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav4-3A0A0B4J1K1 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav4-3A0A0B4J1K1 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav4-3A0A0B4J1K1 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav4-3A0A0B4J1K1 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav4-3A0A0B4J1K1 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Trav4-3A0A0B4J1K1 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Trav4-3A0A0B4J1K1 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav4-3A0A0B4J1K1 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC10.75□□□□□ -0.69
Trav4-3A0A0B4J1K1 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC10.75□□□□□ -0.69
Trav4-3A0A0B4J1K1 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC10.75□□□□□ -0.69
Trav4-3A0A0B4J1K1 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav4-3A0A0B4J1K1 Gm18115-201ENSMUST00000221209 621 ntBASIC10.75□□□□□ -0.69
Trav4-3A0A0B4J1K1 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav4-3A0A0B4J1K1 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
Trav4-3A0A0B4J1K1 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Trav4-3A0A0B4J1K1 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav4-3A0A0B4J1K1 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav4-3A0A0B4J1K1 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav4-3A0A0B4J1K1 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav4-3A0A0B4J1K1 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Trav4-3A0A0B4J1K1 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC10.75□□□□□ -0.69
Trav4-3A0A0B4J1K1 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Trav4-3A0A0B4J1K1 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav4-3A0A0B4J1K1 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav4-3A0A0B4J1K1 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Trav4-3A0A0B4J1K1 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav4-3A0A0B4J1K1 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC10.75□□□□□ -0.69
Trav4-3A0A0B4J1K1 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav4-3A0A0B4J1K1 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav4-3A0A0B4J1K1 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Trav4-3A0A0B4J1K1 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC10.74□□□□□ -0.69
Trav4-3A0A0B4J1K1 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav4-3A0A0B4J1K1 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav4-3A0A0B4J1K1 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav4-3A0A0B4J1K1 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav4-3A0A0B4J1K1 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav4-3A0A0B4J1K1 Zfp264-201ENSMUST00000208656 1563 ntBASIC10.74□□□□□ -0.69
Trav4-3A0A0B4J1K1 Gm12620-201ENSMUST00000119791 1986 ntBASIC10.74□□□□□ -0.69
Trav4-3A0A0B4J1K1 Gm12612-201ENSMUST00000140182 1986 ntBASIC10.74□□□□□ -0.69
Trav4-3A0A0B4J1K1 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav4-3A0A0B4J1K1 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC10.74□□□□□ -0.69
Trav4-3A0A0B4J1K1 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav4-3A0A0B4J1K1 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Trav4-3A0A0B4J1K1 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Trav4-3A0A0B4J1K1 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav4-3A0A0B4J1K1 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav4-3A0A0B4J1K1 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav4-3A0A0B4J1K1 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC10.74□□□□□ -0.69
Trav4-3A0A0B4J1K1 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC10.74□□□□□ -0.69
Trav4-3A0A0B4J1K1 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav4-3A0A0B4J1K1 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav4-3A0A0B4J1K1 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav4-3A0A0B4J1K1 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Trav4-3A0A0B4J1K1 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav4-3A0A0B4J1K1 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav4-3A0A0B4J1K1 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Trav4-3A0A0B4J1K1 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav4-3A0A0B4J1K1 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav4-3A0A0B4J1K1 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Trav4-3A0A0B4J1K1 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Trav4-3A0A0B4J1K1 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav4-3A0A0B4J1K1 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav4-3A0A0B4J1K1 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC10.74□□□□□ -0.69
Trav4-3A0A0B4J1K1 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC10.74□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms