Protein–RNA interactions for Protein: A0A075B615

Trav4n-4, T cell receptor alpha variable 4D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4n-4A0A075B615 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trav4n-4A0A075B615 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC10.96□□□□□ -0.66
Trav4n-4A0A075B615 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trav4n-4A0A075B615 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Trav4n-4A0A075B615 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Trav4n-4A0A075B615 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trav4n-4A0A075B615 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trav4n-4A0A075B615 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Trav4n-4A0A075B615 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trav4n-4A0A075B615 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trav4n-4A0A075B615 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Trav4n-4A0A075B615 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav4n-4A0A075B615 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav4n-4A0A075B615 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Trav4n-4A0A075B615 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Trav4n-4A0A075B615 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav4n-4A0A075B615 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav4n-4A0A075B615 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav4n-4A0A075B615 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Trav4n-4A0A075B615 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Trav4n-4A0A075B615 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav4n-4A0A075B615 Gm38577-201ENSMUST00000221531 4545 ntBASIC10.95□□□□□ -0.66
Trav4n-4A0A075B615 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Trav4n-4A0A075B615 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav4n-4A0A075B615 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav4n-4A0A075B615 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav4n-4A0A075B615 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Trav4n-4A0A075B615 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav4n-4A0A075B615 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav4n-4A0A075B615 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Trav4n-4A0A075B615 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Trav4n-4A0A075B615 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Trav4n-4A0A075B615 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav4n-4A0A075B615 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav4n-4A0A075B615 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav4n-4A0A075B615 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Trav4n-4A0A075B615 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav4n-4A0A075B615 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Trav4n-4A0A075B615 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav4n-4A0A075B615 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Trav4n-4A0A075B615 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Trav4n-4A0A075B615 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav4n-4A0A075B615 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav4n-4A0A075B615 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC10.95□□□□□ -0.66
Trav4n-4A0A075B615 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Trav4n-4A0A075B615 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Trav4n-4A0A075B615 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC10.95□□□□□ -0.66
Trav4n-4A0A075B615 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Trav4n-4A0A075B615 Actl10-202ENSMUST00000226583 1501 ntBASIC10.94□□□□□ -0.66
Trav4n-4A0A075B615 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav4n-4A0A075B615 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav4n-4A0A075B615 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav4n-4A0A075B615 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav4n-4A0A075B615 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Trav4n-4A0A075B615 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav4n-4A0A075B615 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav4n-4A0A075B615 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav4n-4A0A075B615 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav4n-4A0A075B615 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Trav4n-4A0A075B615 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC10.94□□□□□ -0.66
Trav4n-4A0A075B615 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav4n-4A0A075B615 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC10.94□□□□□ -0.66
Trav4n-4A0A075B615 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC10.94□□□□□ -0.66
Trav4n-4A0A075B615 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Trav4n-4A0A075B615 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC10.94□□□□□ -0.66
Trav4n-4A0A075B615 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Trav4n-4A0A075B615 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Trav4n-4A0A075B615 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav4n-4A0A075B615 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav4n-4A0A075B615 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC10.94□□□□□ -0.66
Trav4n-4A0A075B615 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC10.94□□□□□ -0.66
Trav4n-4A0A075B615 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav4n-4A0A075B615 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav4n-4A0A075B615 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Trav4n-4A0A075B615 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav4n-4A0A075B615 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Trav4n-4A0A075B615 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav4n-4A0A075B615 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav4n-4A0A075B615 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Trav4n-4A0A075B615 Fbxl12-205ENSMUST00000140702 1555 ntBASIC10.94□□□□□ -0.66
Trav4n-4A0A075B615 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav4n-4A0A075B615 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav4n-4A0A075B615 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
Trav4n-4A0A075B615 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav4n-4A0A075B615 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Trav4n-4A0A075B615 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav4n-4A0A075B615 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC10.93□□□□□ -0.66
Trav4n-4A0A075B615 Gfra2-202ENSMUST00000227633 1480 ntBASIC10.93□□□□□ -0.66
Trav4n-4A0A075B615 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
Trav4n-4A0A075B615 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav4n-4A0A075B615 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Trav4n-4A0A075B615 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav4n-4A0A075B615 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav4n-4A0A075B615 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav4n-4A0A075B615 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav4n-4A0A075B615 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Trav4n-4A0A075B615 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC10.93□□□□□ -0.66
Trav4n-4A0A075B615 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Trav4n-4A0A075B615 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav4n-4A0A075B615 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms