Protein–RNA interactions for Protein: Q8K353

Cystm1, Cysteine-rich and transmembrane domain-containing protein 1, mousemouse

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cystm1Q8K353 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
Cystm1Q8K353 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.81
Cystm1Q8K353 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.81
Cystm1Q8K353 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Cystm1Q8K353 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Cystm1Q8K353 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Cystm1Q8K353 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC9.96□□□□□ -0.81
Cystm1Q8K353 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Cystm1Q8K353 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
Cystm1Q8K353 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC9.96□□□□□ -0.81
Cystm1Q8K353 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC9.96□□□□□ -0.81
Cystm1Q8K353 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.81
Cystm1Q8K353 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Cystm1Q8K353 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Cystm1Q8K353 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC9.96□□□□□ -0.81
Cystm1Q8K353 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC9.96□□□□□ -0.81
Cystm1Q8K353 Tfap2a-203ENSMUST00000223869 2037 ntBASIC9.96□□□□□ -0.81
Cystm1Q8K353 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.81
Cystm1Q8K353 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Cystm1Q8K353 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.82
Cystm1Q8K353 Gm15565-201ENSMUST00000118890 427 ntBASIC9.96□□□□□ -0.82
Cystm1Q8K353 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC9.96□□□□□ -0.82
Cystm1Q8K353 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC9.96□□□□□ -0.82
Cystm1Q8K353 Gm16042-201ENSMUST00000204813 1247 ntBASIC9.96□□□□□ -0.82
Cystm1Q8K353 Arhgef4-208ENSMUST00000211073 171 ntBASIC9.96□□□□□ -0.82
Cystm1Q8K353 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Cystm1Q8K353 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Cystm1Q8K353 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Cystm1Q8K353 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Cystm1Q8K353 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Cystm1Q8K353 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.82
Cystm1Q8K353 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Cystm1Q8K353 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC9.96□□□□□ -0.82
Cystm1Q8K353 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.82
Cystm1Q8K353 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.82
Cystm1Q8K353 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Cystm1Q8K353 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Cystm1Q8K353 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.82
Cystm1Q8K353 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC9.96□□□□□ -0.82
Cystm1Q8K353 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Cystm1Q8K353 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC9.96□□□□□ -0.82
Cystm1Q8K353 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Cystm1Q8K353 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Cystm1Q8K353 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Cystm1Q8K353 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Cystm1Q8K353 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Cystm1Q8K353 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Cystm1Q8K353 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Cystm1Q8K353 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Cystm1Q8K353 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Cystm1Q8K353 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Cystm1Q8K353 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
Cystm1Q8K353 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC9.95□□□□□ -0.82
Cystm1Q8K353 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC9.95□□□□□ -0.82
Cystm1Q8K353 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Cystm1Q8K353 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Cystm1Q8K353 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC9.95□□□□□ -0.82
Cystm1Q8K353 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC9.95□□□□□ -0.82
Cystm1Q8K353 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Cystm1Q8K353 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
Cystm1Q8K353 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Cystm1Q8K353 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC9.95□□□□□ -0.82
Cystm1Q8K353 AC121577.1-201ENSMUST00000227302 707 ntBASIC9.95□□□□□ -0.82
Cystm1Q8K353 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Cystm1Q8K353 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Cystm1Q8K353 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Cystm1Q8K353 Gm5417-201ENSMUST00000079706 384 ntBASIC9.95□□□□□ -0.82
Cystm1Q8K353 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Cystm1Q8K353 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Cystm1Q8K353 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Cystm1Q8K353 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Cystm1Q8K353 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Cystm1Q8K353 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC9.95□□□□□ -0.82
Cystm1Q8K353 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Cystm1Q8K353 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Cystm1Q8K353 Gm44729-201ENSMUST00000206759 2052 ntBASIC9.95□□□□□ -0.82
Cystm1Q8K353 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Cystm1Q8K353 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
Cystm1Q8K353 Efs-202ENSMUST00000227037 2540 ntBASIC9.95□□□□□ -0.82
Cystm1Q8K353 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC9.95□□□□□ -0.82
Cystm1Q8K353 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Cystm1Q8K353 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Cystm1Q8K353 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC9.94□□□□□ -0.82
Cystm1Q8K353 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Cystm1Q8K353 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Cystm1Q8K353 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
Cystm1Q8K353 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC9.94□□□□□ -0.82
Cystm1Q8K353 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Cystm1Q8K353 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Cystm1Q8K353 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Cystm1Q8K353 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Cystm1Q8K353 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Cystm1Q8K353 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
Cystm1Q8K353 Gm7712-202ENSMUST00000222331 1510 ntBASIC9.94□□□□□ -0.82
Cystm1Q8K353 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Cystm1Q8K353 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Cystm1Q8K353 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Cystm1Q8K353 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
Cystm1Q8K353 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC9.94□□□□□ -0.82
Cystm1Q8K353 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms