Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Cchcr1Q8K2I2 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cchcr1Q8K2I2 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cchcr1Q8K2I2 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cchcr1Q8K2I2 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Cchcr1Q8K2I2 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cchcr1Q8K2I2 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cchcr1Q8K2I2 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cchcr1Q8K2I2 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cchcr1Q8K2I2 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cchcr1Q8K2I2 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cchcr1Q8K2I2 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Cchcr1Q8K2I2 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cchcr1Q8K2I2 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Cchcr1Q8K2I2 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cchcr1Q8K2I2 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cchcr1Q8K2I2 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Cchcr1Q8K2I2 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cchcr1Q8K2I2 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC18.67■□□□□ 0.58
Cchcr1Q8K2I2 Gm17808-201ENSMUST00000200859 894 ntBASIC18.67■□□□□ 0.58
Cchcr1Q8K2I2 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
Cchcr1Q8K2I2 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cchcr1Q8K2I2 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cchcr1Q8K2I2 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cchcr1Q8K2I2 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cchcr1Q8K2I2 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cchcr1Q8K2I2 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC18.67■□□□□ 0.58
Cchcr1Q8K2I2 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cchcr1Q8K2I2 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cchcr1Q8K2I2 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cchcr1Q8K2I2 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cchcr1Q8K2I2 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cchcr1Q8K2I2 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cchcr1Q8K2I2 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Cchcr1Q8K2I2 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cchcr1Q8K2I2 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cchcr1Q8K2I2 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cchcr1Q8K2I2 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cchcr1Q8K2I2 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cchcr1Q8K2I2 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cchcr1Q8K2I2 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Cchcr1Q8K2I2 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cchcr1Q8K2I2 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Cchcr1Q8K2I2 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC18.66■□□□□ 0.58
Cchcr1Q8K2I2 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC18.66■□□□□ 0.58
Cchcr1Q8K2I2 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Cchcr1Q8K2I2 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
Cchcr1Q8K2I2 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
Cchcr1Q8K2I2 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cchcr1Q8K2I2 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cchcr1Q8K2I2 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cchcr1Q8K2I2 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cchcr1Q8K2I2 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cchcr1Q8K2I2 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Cchcr1Q8K2I2 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cchcr1Q8K2I2 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Cchcr1Q8K2I2 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cchcr1Q8K2I2 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cchcr1Q8K2I2 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cchcr1Q8K2I2 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cchcr1Q8K2I2 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Cchcr1Q8K2I2 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Cchcr1Q8K2I2 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cchcr1Q8K2I2 Wnt10b-206ENSMUST00000228546 2709 ntBASIC18.65■□□□□ 0.58
Cchcr1Q8K2I2 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC18.65■□□□□ 0.58
Cchcr1Q8K2I2 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cchcr1Q8K2I2 Gm13312-201ENSMUST00000119631 718 ntBASIC18.65■□□□□ 0.58
Cchcr1Q8K2I2 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC18.65■□□□□ 0.58
Cchcr1Q8K2I2 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC18.65■□□□□ 0.58
Cchcr1Q8K2I2 Gm29518-201ENSMUST00000190858 372 ntBASIC18.65■□□□□ 0.58
Cchcr1Q8K2I2 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cchcr1Q8K2I2 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cchcr1Q8K2I2 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Cchcr1Q8K2I2 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cchcr1Q8K2I2 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cchcr1Q8K2I2 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cchcr1Q8K2I2 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cchcr1Q8K2I2 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cchcr1Q8K2I2 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Cchcr1Q8K2I2 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cchcr1Q8K2I2 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC18.65■□□□□ 0.58
Cchcr1Q8K2I2 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cchcr1Q8K2I2 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC18.65■□□□□ 0.58
Cchcr1Q8K2I2 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cchcr1Q8K2I2 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cchcr1Q8K2I2 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cchcr1Q8K2I2 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cchcr1Q8K2I2 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cchcr1Q8K2I2 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC18.65■□□□□ 0.58
Cchcr1Q8K2I2 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Cchcr1Q8K2I2 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Cchcr1Q8K2I2 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Cchcr1Q8K2I2 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Cchcr1Q8K2I2 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC18.64■□□□□ 0.58
Cchcr1Q8K2I2 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Cchcr1Q8K2I2 Gm45212-201ENSMUST00000205831 3403 ntBASIC18.64■□□□□ 0.57
Cchcr1Q8K2I2 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Cchcr1Q8K2I2 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC18.64■□□□□ 0.57
Cchcr1Q8K2I2 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
Cchcr1Q8K2I2 Gm1818-201ENSMUST00000169406 1184 ntBASIC18.64■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms