Protein–RNA interactions for Protein: Q8CGU1

Calcoco1, Calcium-binding and coiled-coil domain-containing protein 1, mousemouse

Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Calcoco1Q8CGU1 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Calcoco1Q8CGU1 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Calcoco1Q8CGU1 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Calcoco1Q8CGU1 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Calcoco1Q8CGU1 Gm18032-201ENSMUST00000222541 538 ntBASIC16.51■□□□□ 0.23
Calcoco1Q8CGU1 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Calcoco1Q8CGU1 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC16.51■□□□□ 0.23
Calcoco1Q8CGU1 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Calcoco1Q8CGU1 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Calcoco1Q8CGU1 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Calcoco1Q8CGU1 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
Calcoco1Q8CGU1 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Calcoco1Q8CGU1 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Calcoco1Q8CGU1 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC16.51■□□□□ 0.23
Calcoco1Q8CGU1 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Calcoco1Q8CGU1 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Calcoco1Q8CGU1 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Calcoco1Q8CGU1 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Calcoco1Q8CGU1 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Calcoco1Q8CGU1 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Calcoco1Q8CGU1 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Calcoco1Q8CGU1 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Calcoco1Q8CGU1 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Calcoco1Q8CGU1 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC16.5■□□□□ 0.23
Calcoco1Q8CGU1 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Calcoco1Q8CGU1 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Calcoco1Q8CGU1 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC16.5■□□□□ 0.23
Calcoco1Q8CGU1 AC134329.2-201ENSMUST00000217897 428 ntBASIC16.5■□□□□ 0.23
Calcoco1Q8CGU1 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Calcoco1Q8CGU1 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Calcoco1Q8CGU1 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Calcoco1Q8CGU1 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Calcoco1Q8CGU1 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Calcoco1Q8CGU1 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC16.5■□□□□ 0.23
Calcoco1Q8CGU1 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Calcoco1Q8CGU1 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Calcoco1Q8CGU1 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Calcoco1Q8CGU1 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Calcoco1Q8CGU1 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Calcoco1Q8CGU1 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Calcoco1Q8CGU1 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Calcoco1Q8CGU1 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Calcoco1Q8CGU1 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Calcoco1Q8CGU1 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC16.49■□□□□ 0.23
Calcoco1Q8CGU1 Gm13474-201ENSMUST00000122466 815 ntBASIC16.49■□□□□ 0.23
Calcoco1Q8CGU1 Gm18958-201ENSMUST00000174258 762 ntBASIC16.49■□□□□ 0.23
Calcoco1Q8CGU1 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Calcoco1Q8CGU1 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Calcoco1Q8CGU1 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Calcoco1Q8CGU1 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Calcoco1Q8CGU1 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Calcoco1Q8CGU1 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Calcoco1Q8CGU1 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Calcoco1Q8CGU1 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Calcoco1Q8CGU1 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Calcoco1Q8CGU1 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC16.48■□□□□ 0.23
Calcoco1Q8CGU1 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Calcoco1Q8CGU1 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Calcoco1Q8CGU1 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Calcoco1Q8CGU1 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Calcoco1Q8CGU1 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Calcoco1Q8CGU1 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Calcoco1Q8CGU1 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Calcoco1Q8CGU1 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC16.48■□□□□ 0.23
Calcoco1Q8CGU1 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Calcoco1Q8CGU1 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Calcoco1Q8CGU1 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Calcoco1Q8CGU1 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Calcoco1Q8CGU1 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Calcoco1Q8CGU1 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
Calcoco1Q8CGU1 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Calcoco1Q8CGU1 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC16.48■□□□□ 0.23
Calcoco1Q8CGU1 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC16.48■□□□□ 0.23
Calcoco1Q8CGU1 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC16.48■□□□□ 0.23
Calcoco1Q8CGU1 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Calcoco1Q8CGU1 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Calcoco1Q8CGU1 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Calcoco1Q8CGU1 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Calcoco1Q8CGU1 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Calcoco1Q8CGU1 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Calcoco1Q8CGU1 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Calcoco1Q8CGU1 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Calcoco1Q8CGU1 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Calcoco1Q8CGU1 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Calcoco1Q8CGU1 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Calcoco1Q8CGU1 Spsb2-203ENSMUST00000112473 1322 ntBASIC16.47■□□□□ 0.23
Calcoco1Q8CGU1 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Calcoco1Q8CGU1 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Calcoco1Q8CGU1 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Calcoco1Q8CGU1 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC16.47■□□□□ 0.23
Calcoco1Q8CGU1 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC16.47■□□□□ 0.23
Calcoco1Q8CGU1 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Calcoco1Q8CGU1 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Calcoco1Q8CGU1 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC16.47■□□□□ 0.23
Calcoco1Q8CGU1 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC16.47■□□□□ 0.23
Calcoco1Q8CGU1 Gm10013-201ENSMUST00000106074 672 ntBASIC16.47■□□□□ 0.23
Calcoco1Q8CGU1 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC16.47■□□□□ 0.23
Calcoco1Q8CGU1 Gm22697-201ENSMUST00000175194 63 ntBASIC16.47■□□□□ 0.23
Calcoco1Q8CGU1 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Calcoco1Q8CGU1 Gm18101-201ENSMUST00000215769 548 ntBASIC16.47■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms