Protein–RNA interactions for Protein: Q8CA71

Shisa4, Protein shisa-4, mousemouse

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa4Q8CA71 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC18.27■□□□□ 0.52
Shisa4Q8CA71 Mir5126-201ENSMUST00000175513 77 ntBASIC18.27■□□□□ 0.52
Shisa4Q8CA71 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC18.27■□□□□ 0.52
Shisa4Q8CA71 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC18.27■□□□□ 0.52
Shisa4Q8CA71 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC18.27■□□□□ 0.52
Shisa4Q8CA71 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC18.27■□□□□ 0.52
Shisa4Q8CA71 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Shisa4Q8CA71 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Shisa4Q8CA71 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Shisa4Q8CA71 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Shisa4Q8CA71 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC18.27■□□□□ 0.51
Shisa4Q8CA71 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Shisa4Q8CA71 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Shisa4Q8CA71 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Shisa4Q8CA71 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Shisa4Q8CA71 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Shisa4Q8CA71 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Shisa4Q8CA71 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Shisa4Q8CA71 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Shisa4Q8CA71 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC18.26■□□□□ 0.51
Shisa4Q8CA71 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Shisa4Q8CA71 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Shisa4Q8CA71 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Shisa4Q8CA71 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Shisa4Q8CA71 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Shisa4Q8CA71 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC18.26■□□□□ 0.51
Shisa4Q8CA71 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Shisa4Q8CA71 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Shisa4Q8CA71 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Shisa4Q8CA71 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Shisa4Q8CA71 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Shisa4Q8CA71 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
Shisa4Q8CA71 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Shisa4Q8CA71 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Shisa4Q8CA71 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Shisa4Q8CA71 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Shisa4Q8CA71 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Shisa4Q8CA71 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Shisa4Q8CA71 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Shisa4Q8CA71 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC18.25■□□□□ 0.51
Shisa4Q8CA71 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Shisa4Q8CA71 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC18.25■□□□□ 0.51
Shisa4Q8CA71 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC18.25■□□□□ 0.51
Shisa4Q8CA71 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC18.25■□□□□ 0.51
Shisa4Q8CA71 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Shisa4Q8CA71 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Shisa4Q8CA71 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Shisa4Q8CA71 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Shisa4Q8CA71 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Shisa4Q8CA71 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Shisa4Q8CA71 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC18.25■□□□□ 0.51
Shisa4Q8CA71 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Shisa4Q8CA71 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Shisa4Q8CA71 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Shisa4Q8CA71 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Shisa4Q8CA71 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Shisa4Q8CA71 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Shisa4Q8CA71 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Shisa4Q8CA71 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Shisa4Q8CA71 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC18.24■□□□□ 0.51
Shisa4Q8CA71 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Shisa4Q8CA71 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Shisa4Q8CA71 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Shisa4Q8CA71 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Shisa4Q8CA71 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC18.24■□□□□ 0.51
Shisa4Q8CA71 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Shisa4Q8CA71 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Shisa4Q8CA71 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC18.24■□□□□ 0.51
Shisa4Q8CA71 Gm27702-201ENSMUST00000184512 56 ntBASIC18.24■□□□□ 0.51
Shisa4Q8CA71 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC18.24■□□□□ 0.51
Shisa4Q8CA71 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Shisa4Q8CA71 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Shisa4Q8CA71 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Shisa4Q8CA71 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Shisa4Q8CA71 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Shisa4Q8CA71 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Shisa4Q8CA71 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Shisa4Q8CA71 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Shisa4Q8CA71 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC18.24■□□□□ 0.51
Shisa4Q8CA71 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Shisa4Q8CA71 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Shisa4Q8CA71 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC18.23■□□□□ 0.51
Shisa4Q8CA71 Gm13036-201ENSMUST00000117799 748 ntBASIC18.23■□□□□ 0.51
Shisa4Q8CA71 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC18.23■□□□□ 0.51
Shisa4Q8CA71 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Shisa4Q8CA71 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Shisa4Q8CA71 Gm27628-201ENSMUST00000184911 107 ntBASIC18.23■□□□□ 0.51
Shisa4Q8CA71 AV026068-213ENSMUST00000223675 1171 ntBASIC18.23■□□□□ 0.51
Shisa4Q8CA71 AC160980.1-201ENSMUST00000224136 970 ntBASIC18.23■□□□□ 0.51
Shisa4Q8CA71 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Shisa4Q8CA71 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Shisa4Q8CA71 Gm15590-201ENSMUST00000078419 552 ntBASIC18.23■□□□□ 0.51
Shisa4Q8CA71 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Shisa4Q8CA71 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Shisa4Q8CA71 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Shisa4Q8CA71 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Shisa4Q8CA71 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Shisa4Q8CA71 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Shisa4Q8CA71 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Shisa4Q8CA71 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms