Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Clrn3Q8BHH8 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Clrn3Q8BHH8 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Clrn3Q8BHH8 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Clrn3Q8BHH8 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Clrn3Q8BHH8 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Clrn3Q8BHH8 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Clrn3Q8BHH8 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Clrn3Q8BHH8 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Clrn3Q8BHH8 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Clrn3Q8BHH8 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Clrn3Q8BHH8 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Clrn3Q8BHH8 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Clrn3Q8BHH8 Gm13312-201ENSMUST00000119631 718 ntBASIC14.83□□□□□ -0.04
Clrn3Q8BHH8 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Clrn3Q8BHH8 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Clrn3Q8BHH8 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Clrn3Q8BHH8 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Clrn3Q8BHH8 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Clrn3Q8BHH8 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Clrn3Q8BHH8 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Clrn3Q8BHH8 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Clrn3Q8BHH8 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Clrn3Q8BHH8 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC14.83□□□□□ -0.04
Clrn3Q8BHH8 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Clrn3Q8BHH8 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Clrn3Q8BHH8 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Clrn3Q8BHH8 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC14.83□□□□□ -0.04
Clrn3Q8BHH8 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC14.83□□□□□ -0.04
Clrn3Q8BHH8 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Clrn3Q8BHH8 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Clrn3Q8BHH8 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Clrn3Q8BHH8 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Clrn3Q8BHH8 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Clrn3Q8BHH8 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Clrn3Q8BHH8 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Clrn3Q8BHH8 Gm6858-201ENSMUST00000208582 1468 ntBASIC14.82□□□□□ -0.04
Clrn3Q8BHH8 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC14.82□□□□□ -0.04
Clrn3Q8BHH8 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Clrn3Q8BHH8 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Clrn3Q8BHH8 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Clrn3Q8BHH8 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Clrn3Q8BHH8 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Clrn3Q8BHH8 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Clrn3Q8BHH8 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Clrn3Q8BHH8 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Clrn3Q8BHH8 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Clrn3Q8BHH8 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Clrn3Q8BHH8 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC14.82□□□□□ -0.04
Clrn3Q8BHH8 AC132265.1-201ENSMUST00000219233 1665 ntBASIC14.82□□□□□ -0.04
Clrn3Q8BHH8 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Clrn3Q8BHH8 Gm14859-201ENSMUST00000117752 357 ntBASIC14.82□□□□□ -0.04
Clrn3Q8BHH8 Rprl3-201ENSMUST00000157400 290 ntBASIC14.82□□□□□ -0.04
Clrn3Q8BHH8 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC14.82□□□□□ -0.04
Clrn3Q8BHH8 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
Clrn3Q8BHH8 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC14.82□□□□□ -0.04
Clrn3Q8BHH8 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Clrn3Q8BHH8 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Clrn3Q8BHH8 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Clrn3Q8BHH8 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Clrn3Q8BHH8 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Clrn3Q8BHH8 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Clrn3Q8BHH8 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Clrn3Q8BHH8 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Clrn3Q8BHH8 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC14.82□□□□□ -0.04
Clrn3Q8BHH8 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC14.82□□□□□ -0.04
Clrn3Q8BHH8 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Clrn3Q8BHH8 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Clrn3Q8BHH8 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Clrn3Q8BHH8 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Clrn3Q8BHH8 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Clrn3Q8BHH8 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC14.82□□□□□ -0.04
Clrn3Q8BHH8 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Clrn3Q8BHH8 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Clrn3Q8BHH8 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Clrn3Q8BHH8 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Clrn3Q8BHH8 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Clrn3Q8BHH8 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Clrn3Q8BHH8 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Clrn3Q8BHH8 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Clrn3Q8BHH8 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Clrn3Q8BHH8 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Clrn3Q8BHH8 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Clrn3Q8BHH8 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Clrn3Q8BHH8 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC14.81□□□□□ -0.04
Clrn3Q8BHH8 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Clrn3Q8BHH8 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC14.81□□□□□ -0.04
Clrn3Q8BHH8 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Clrn3Q8BHH8 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
Clrn3Q8BHH8 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Clrn3Q8BHH8 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
Clrn3Q8BHH8 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Clrn3Q8BHH8 Gm10584-201ENSMUST00000207036 2628 ntBASIC14.81□□□□□ -0.04
Clrn3Q8BHH8 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Clrn3Q8BHH8 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Clrn3Q8BHH8 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Clrn3Q8BHH8 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Clrn3Q8BHH8 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Clrn3Q8BHH8 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC14.81□□□□□ -0.04
Clrn3Q8BHH8 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC14.81□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms