Protein–RNA interactions for Protein: Q6ISU1

PTCRA, Pre T-cell antigen receptor alpha, humanhuman

Predicted RBP Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCRAQ6ISU1 AC004832.2-201ENST00000426397 482 ntBASIC19.18■□□□□ 0.66
PTCRAQ6ISU1 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC19.18■□□□□ 0.66
PTCRAQ6ISU1 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC19.18■□□□□ 0.66
PTCRAQ6ISU1 RNA5SP416-201ENST00000516838 111 ntBASIC19.18■□□□□ 0.66
PTCRAQ6ISU1 SART3-203ENST00000546611 1184 ntBASIC19.18■□□□□ 0.66
PTCRAQ6ISU1 PAM16-208ENST00000573553 722 ntTSL 2 BASIC19.18■□□□□ 0.66
PTCRAQ6ISU1 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC19.18■□□□□ 0.66
PTCRAQ6ISU1 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
PTCRAQ6ISU1 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
PTCRAQ6ISU1 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PTCRAQ6ISU1 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC19.18■□□□□ 0.66
PTCRAQ6ISU1 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
PTCRAQ6ISU1 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC19.17■□□□□ 0.66
PTCRAQ6ISU1 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PTCRAQ6ISU1 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC19.17■□□□□ 0.66
PTCRAQ6ISU1 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
PTCRAQ6ISU1 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC19.17■□□□□ 0.66
PTCRAQ6ISU1 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC19.17■□□□□ 0.66
PTCRAQ6ISU1 METTL21AP1-201ENST00000438852 635 ntBASIC19.17■□□□□ 0.66
PTCRAQ6ISU1 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
PTCRAQ6ISU1 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC19.17■□□□□ 0.66
PTCRAQ6ISU1 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC19.17■□□□□ 0.66
PTCRAQ6ISU1 AC002347.1-201ENST00000569543 541 ntBASIC19.17■□□□□ 0.66
PTCRAQ6ISU1 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PTCRAQ6ISU1 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC19.17■□□□□ 0.66
PTCRAQ6ISU1 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC19.17■□□□□ 0.66
PTCRAQ6ISU1 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
PTCRAQ6ISU1 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.17■□□□□ 0.66
PTCRAQ6ISU1 DET1-207ENST00000564406 2315 ntTSL 2 BASIC19.17■□□□□ 0.66
PTCRAQ6ISU1 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PTCRAQ6ISU1 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC19.17■□□□□ 0.66
PTCRAQ6ISU1 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
PTCRAQ6ISU1 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
PTCRAQ6ISU1 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PTCRAQ6ISU1 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PTCRAQ6ISU1 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
PTCRAQ6ISU1 AC211486.1-202ENST00000416371 468 ntBASIC19.16■□□□□ 0.66
PTCRAQ6ISU1 CYMP-203ENST00000474680 1263 ntBASIC19.16■□□□□ 0.66
PTCRAQ6ISU1 AC211476.1-201ENST00000503899 468 ntBASIC19.16■□□□□ 0.66
PTCRAQ6ISU1 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC19.16■□□□□ 0.66
PTCRAQ6ISU1 OR7E14P-202ENST00000530490 1290 ntBASIC19.16■□□□□ 0.66
PTCRAQ6ISU1 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
PTCRAQ6ISU1 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
PTCRAQ6ISU1 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PTCRAQ6ISU1 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
PTCRAQ6ISU1 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
PTCRAQ6ISU1 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
PTCRAQ6ISU1 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC19.16■□□□□ 0.66
PTCRAQ6ISU1 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC19.16■□□□□ 0.66
PTCRAQ6ISU1 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC19.16■□□□□ 0.66
PTCRAQ6ISU1 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC19.16■□□□□ 0.66
PTCRAQ6ISU1 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC19.16■□□□□ 0.66
PTCRAQ6ISU1 AIRN-201ENST00000601203 4374 ntBASIC19.16■□□□□ 0.66
PTCRAQ6ISU1 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PTCRAQ6ISU1 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
PTCRAQ6ISU1 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PTCRAQ6ISU1 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PTCRAQ6ISU1 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PTCRAQ6ISU1 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC19.15■□□□□ 0.66
PTCRAQ6ISU1 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PTCRAQ6ISU1 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC19.15■□□□□ 0.66
PTCRAQ6ISU1 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC19.15■□□□□ 0.66
PTCRAQ6ISU1 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC19.15■□□□□ 0.66
PTCRAQ6ISU1 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC19.15■□□□□ 0.66
PTCRAQ6ISU1 AC012640.2-201ENST00000561606 901 ntBASIC19.15■□□□□ 0.66
PTCRAQ6ISU1 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC19.15■□□□□ 0.66
PTCRAQ6ISU1 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC19.15■□□□□ 0.66
PTCRAQ6ISU1 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC19.15■□□□□ 0.66
PTCRAQ6ISU1 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
PTCRAQ6ISU1 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
PTCRAQ6ISU1 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC19.15■□□□□ 0.66
PTCRAQ6ISU1 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
PTCRAQ6ISU1 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PTCRAQ6ISU1 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PTCRAQ6ISU1 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PTCRAQ6ISU1 CYP51A1P1-201ENST00000492267 1507 ntBASIC19.15■□□□□ 0.66
PTCRAQ6ISU1 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PTCRAQ6ISU1 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PTCRAQ6ISU1 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PTCRAQ6ISU1 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC19.14■□□□□ 0.66
PTCRAQ6ISU1 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
PTCRAQ6ISU1 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
PTCRAQ6ISU1 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.66
PTCRAQ6ISU1 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PTCRAQ6ISU1 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PTCRAQ6ISU1 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PTCRAQ6ISU1 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
PTCRAQ6ISU1 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
PTCRAQ6ISU1 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
PTCRAQ6ISU1 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC19.14■□□□□ 0.65
PTCRAQ6ISU1 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PTCRAQ6ISU1 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC19.14■□□□□ 0.65
PTCRAQ6ISU1 AC244107.1-201ENST00000442033 332 ntBASIC19.14■□□□□ 0.65
PTCRAQ6ISU1 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC19.14■□□□□ 0.65
PTCRAQ6ISU1 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC19.14■□□□□ 0.65
PTCRAQ6ISU1 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC19.14■□□□□ 0.65
PTCRAQ6ISU1 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC19.14■□□□□ 0.65
PTCRAQ6ISU1 AL596442.2-201ENST00000610240 980 ntBASIC19.14■□□□□ 0.65
PTCRAQ6ISU1 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
PTCRAQ6ISU1 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms