Protein–RNA interactions for Protein: Q61216

Mre11, Double-strand break repair protein MRE11, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mre11Q61216 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Mre11Q61216 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Mre11Q61216 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Mre11Q61216 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Mre11Q61216 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Mre11Q61216 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Mre11Q61216 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Mre11Q61216 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Mre11Q61216 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Mre11Q61216 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Mre11Q61216 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Mre11Q61216 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Mre11Q61216 Gm3807-201ENSMUST00000193520 1168 ntBASIC18.95■□□□□ 0.62
Mre11Q61216 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Mre11Q61216 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC18.95■□□□□ 0.62
Mre11Q61216 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Mre11Q61216 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Mre11Q61216 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Mre11Q61216 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Mre11Q61216 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC18.95■□□□□ 0.62
Mre11Q61216 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Mre11Q61216 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Mre11Q61216 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC18.95■□□□□ 0.62
Mre11Q61216 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Mre11Q61216 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Mre11Q61216 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Mre11Q61216 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Mre11Q61216 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Mre11Q61216 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Mre11Q61216 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Mre11Q61216 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC18.94■□□□□ 0.62
Mre11Q61216 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Mre11Q61216 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Mre11Q61216 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
Mre11Q61216 Gm43859-201ENSMUST00000200075 1412 ntBASIC18.94■□□□□ 0.62
Mre11Q61216 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Mre11Q61216 Gm12620-201ENSMUST00000119791 1986 ntBASIC18.94■□□□□ 0.62
Mre11Q61216 Gm12612-201ENSMUST00000140182 1986 ntBASIC18.94■□□□□ 0.62
Mre11Q61216 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
Mre11Q61216 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Mre11Q61216 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Mre11Q61216 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Mre11Q61216 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC18.94■□□□□ 0.62
Mre11Q61216 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC18.94■□□□□ 0.62
Mre11Q61216 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Mre11Q61216 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Mre11Q61216 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Mre11Q61216 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Mre11Q61216 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Mre11Q61216 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC18.94■□□□□ 0.62
Mre11Q61216 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Mre11Q61216 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Mre11Q61216 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Mre11Q61216 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Mre11Q61216 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Mre11Q61216 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
Mre11Q61216 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Mre11Q61216 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Mre11Q61216 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Mre11Q61216 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
Mre11Q61216 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Mre11Q61216 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC18.93■□□□□ 0.62
Mre11Q61216 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Mre11Q61216 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Mre11Q61216 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Mre11Q61216 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Mre11Q61216 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC18.93■□□□□ 0.62
Mre11Q61216 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Mre11Q61216 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Mre11Q61216 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Mre11Q61216 Gm12896-201ENSMUST00000118430 226 ntBASIC18.93■□□□□ 0.62
Mre11Q61216 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC18.93■□□□□ 0.62
Mre11Q61216 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC18.93■□□□□ 0.62
Mre11Q61216 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Mre11Q61216 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Mre11Q61216 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Mre11Q61216 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Mre11Q61216 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Mre11Q61216 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Mre11Q61216 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Mre11Q61216 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Mre11Q61216 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Mre11Q61216 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Mre11Q61216 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Mre11Q61216 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
Mre11Q61216 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Mre11Q61216 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Mre11Q61216 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Mre11Q61216 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Mre11Q61216 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Mre11Q61216 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Mre11Q61216 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Mre11Q61216 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC18.92■□□□□ 0.62
Mre11Q61216 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Mre11Q61216 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Mre11Q61216 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Mre11Q61216 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Mre11Q61216 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Mre11Q61216 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Mre11Q61216 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms