Protein–RNA interactions for Protein: Q5R1I9

Trav2, T cell receptor alpha variable 2 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav2Q5R1I9 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC12.61□□□□□ -0.39
Trav2Q5R1I9 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Trav2Q5R1I9 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Trav2Q5R1I9 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav2Q5R1I9 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav2Q5R1I9 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Trav2Q5R1I9 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Trav2Q5R1I9 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav2Q5R1I9 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav2Q5R1I9 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav2Q5R1I9 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav2Q5R1I9 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav2Q5R1I9 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav2Q5R1I9 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav2Q5R1I9 Gm15173-201ENSMUST00000122049 433 ntBASIC12.6□□□□□ -0.39
Trav2Q5R1I9 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC12.6□□□□□ -0.39
Trav2Q5R1I9 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav2Q5R1I9 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav2Q5R1I9 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav2Q5R1I9 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC12.6□□□□□ -0.39
Trav2Q5R1I9 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav2Q5R1I9 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav2Q5R1I9 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC12.6□□□□□ -0.39
Trav2Q5R1I9 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav2Q5R1I9 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav2Q5R1I9 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav2Q5R1I9 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav2Q5R1I9 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav2Q5R1I9 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav2Q5R1I9 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav2Q5R1I9 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Trav2Q5R1I9 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav2Q5R1I9 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav2Q5R1I9 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav2Q5R1I9 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav2Q5R1I9 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC12.59□□□□□ -0.39
Trav2Q5R1I9 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Trav2Q5R1I9 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav2Q5R1I9 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC12.59□□□□□ -0.39
Trav2Q5R1I9 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav2Q5R1I9 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC12.59□□□□□ -0.39
Trav2Q5R1I9 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav2Q5R1I9 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav2Q5R1I9 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Trav2Q5R1I9 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Trav2Q5R1I9 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Trav2Q5R1I9 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav2Q5R1I9 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav2Q5R1I9 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav2Q5R1I9 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav2Q5R1I9 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC12.59□□□□□ -0.39
Trav2Q5R1I9 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav2Q5R1I9 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav2Q5R1I9 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Trav2Q5R1I9 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav2Q5R1I9 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav2Q5R1I9 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC12.59□□□□□ -0.39
Trav2Q5R1I9 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav2Q5R1I9 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav2Q5R1I9 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav2Q5R1I9 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav2Q5R1I9 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Trav2Q5R1I9 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Trav2Q5R1I9 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.39
Trav2Q5R1I9 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC12.58□□□□□ -0.39
Trav2Q5R1I9 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Trav2Q5R1I9 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav2Q5R1I9 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav2Q5R1I9 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav2Q5R1I9 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav2Q5R1I9 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav2Q5R1I9 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav2Q5R1I9 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav2Q5R1I9 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav2Q5R1I9 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC12.58□□□□□ -0.4
Trav2Q5R1I9 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Trav2Q5R1I9 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav2Q5R1I9 Gm37500-201ENSMUST00000192059 1443 ntBASIC12.58□□□□□ -0.4
Trav2Q5R1I9 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav2Q5R1I9 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav2Q5R1I9 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav2Q5R1I9 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav2Q5R1I9 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav2Q5R1I9 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav2Q5R1I9 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav2Q5R1I9 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav2Q5R1I9 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav2Q5R1I9 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC12.58□□□□□ -0.4
Trav2Q5R1I9 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Trav2Q5R1I9 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav2Q5R1I9 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav2Q5R1I9 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav2Q5R1I9 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav2Q5R1I9 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav2Q5R1I9 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav2Q5R1I9 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Trav2Q5R1I9 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Trav2Q5R1I9 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Trav2Q5R1I9 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav2Q5R1I9 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms