Protein–RNA interactions for Protein: Q3USH1

Fam196a, Protein FAM196A, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam196aQ3USH1 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Fam196aQ3USH1 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Fam196aQ3USH1 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Fam196aQ3USH1 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC15.8■□□□□ 0.12
Fam196aQ3USH1 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC15.8■□□□□ 0.12
Fam196aQ3USH1 Gm27618-201ENSMUST00000183671 60 ntBASIC15.8■□□□□ 0.12
Fam196aQ3USH1 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC15.8■□□□□ 0.12
Fam196aQ3USH1 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Fam196aQ3USH1 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Fam196aQ3USH1 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Fam196aQ3USH1 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Fam196aQ3USH1 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Fam196aQ3USH1 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Fam196aQ3USH1 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Fam196aQ3USH1 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Fam196aQ3USH1 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Fam196aQ3USH1 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Fam196aQ3USH1 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Fam196aQ3USH1 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Fam196aQ3USH1 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Fam196aQ3USH1 Haglr-201ENSMUST00000100000 2085 ntBASIC15.79■□□□□ 0.12
Fam196aQ3USH1 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Fam196aQ3USH1 Mir7684-201ENSMUST00000183858 60 ntBASIC15.79■□□□□ 0.12
Fam196aQ3USH1 Gm43433-201ENSMUST00000196573 481 ntBASIC15.79■□□□□ 0.12
Fam196aQ3USH1 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC15.79■□□□□ 0.12
Fam196aQ3USH1 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Fam196aQ3USH1 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Fam196aQ3USH1 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Fam196aQ3USH1 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Fam196aQ3USH1 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Fam196aQ3USH1 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Fam196aQ3USH1 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Fam196aQ3USH1 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Fam196aQ3USH1 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Fam196aQ3USH1 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Fam196aQ3USH1 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Fam196aQ3USH1 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
Fam196aQ3USH1 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Fam196aQ3USH1 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Fam196aQ3USH1 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Fam196aQ3USH1 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Fam196aQ3USH1 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Fam196aQ3USH1 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC15.78■□□□□ 0.12
Fam196aQ3USH1 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Fam196aQ3USH1 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Fam196aQ3USH1 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Fam196aQ3USH1 Shroom3-211ENSMUST00000225438 5742 ntBASIC15.78■□□□□ 0.12
Fam196aQ3USH1 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Fam196aQ3USH1 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Fam196aQ3USH1 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Fam196aQ3USH1 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Fam196aQ3USH1 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Fam196aQ3USH1 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC15.78■□□□□ 0.12
Fam196aQ3USH1 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC15.78■□□□□ 0.12
Fam196aQ3USH1 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC15.78■□□□□ 0.12
Fam196aQ3USH1 AC132467.2-202ENSMUST00000227726 559 ntBASIC15.78■□□□□ 0.12
Fam196aQ3USH1 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Fam196aQ3USH1 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Fam196aQ3USH1 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Fam196aQ3USH1 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Fam196aQ3USH1 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Fam196aQ3USH1 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Fam196aQ3USH1 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Fam196aQ3USH1 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Fam196aQ3USH1 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Fam196aQ3USH1 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Fam196aQ3USH1 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Fam196aQ3USH1 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Fam196aQ3USH1 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Fam196aQ3USH1 Gm15222-202ENSMUST00000228667 1726 ntBASIC15.77■□□□□ 0.12
Fam196aQ3USH1 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Fam196aQ3USH1 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Fam196aQ3USH1 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.12
Fam196aQ3USH1 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Fam196aQ3USH1 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Fam196aQ3USH1 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC15.77■□□□□ 0.12
Fam196aQ3USH1 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Fam196aQ3USH1 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Fam196aQ3USH1 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Fam196aQ3USH1 Gm12008-201ENSMUST00000117791 755 ntBASIC15.77■□□□□ 0.12
Fam196aQ3USH1 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Fam196aQ3USH1 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC15.77■□□□□ 0.12
Fam196aQ3USH1 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Fam196aQ3USH1 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC15.77■□□□□ 0.12
Fam196aQ3USH1 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
Fam196aQ3USH1 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC15.77■□□□□ 0.11
Fam196aQ3USH1 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Fam196aQ3USH1 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Fam196aQ3USH1 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Fam196aQ3USH1 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
Fam196aQ3USH1 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Fam196aQ3USH1 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Fam196aQ3USH1 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
Fam196aQ3USH1 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Fam196aQ3USH1 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC15.76■□□□□ 0.11
Fam196aQ3USH1 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
Fam196aQ3USH1 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Fam196aQ3USH1 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Fam196aQ3USH1 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Fam196aQ3USH1 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC15.76■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms