Protein–RNA interactions for Protein: P61025

Cks1b, Cyclin-dependent kinases regulatory subunit 1, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1bP61025 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC11.28□□□□□ -0.6
Cks1bP61025 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cks1bP61025 Asic1-205ENSMUST00000228185 1818 ntBASIC11.28□□□□□ -0.6
Cks1bP61025 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
Cks1bP61025 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Cks1bP61025 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cks1bP61025 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Cks1bP61025 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cks1bP61025 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cks1bP61025 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC11.28□□□□□ -0.6
Cks1bP61025 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC11.28□□□□□ -0.6
Cks1bP61025 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cks1bP61025 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Cks1bP61025 Gm12382-201ENSMUST00000122005 922 ntBASIC11.28□□□□□ -0.6
Cks1bP61025 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Cks1bP61025 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC11.28□□□□□ -0.6
Cks1bP61025 AC166341.7-201ENSMUST00000221698 126 ntBASIC11.28□□□□□ -0.6
Cks1bP61025 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC11.28□□□□□ -0.6
Cks1bP61025 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cks1bP61025 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC11.28□□□□□ -0.6
Cks1bP61025 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cks1bP61025 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Cks1bP61025 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cks1bP61025 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cks1bP61025 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cks1bP61025 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cks1bP61025 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Cks1bP61025 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC11.28□□□□□ -0.6
Cks1bP61025 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Cks1bP61025 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
Cks1bP61025 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC11.28□□□□□ -0.6
Cks1bP61025 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cks1bP61025 Gm5422-201ENSMUST00000050717 2721 ntBASIC11.28□□□□□ -0.6
Cks1bP61025 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cks1bP61025 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC11.28□□□□□ -0.6
Cks1bP61025 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Cks1bP61025 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Cks1bP61025 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.6
Cks1bP61025 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Cks1bP61025 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Cks1bP61025 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Cks1bP61025 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Cks1bP61025 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Cks1bP61025 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Cks1bP61025 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Cks1bP61025 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Cks1bP61025 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Cks1bP61025 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cks1bP61025 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cks1bP61025 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cks1bP61025 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Cks1bP61025 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
Cks1bP61025 Gm12896-201ENSMUST00000118430 226 ntBASIC11.27□□□□□ -0.61
Cks1bP61025 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC11.27□□□□□ -0.61
Cks1bP61025 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cks1bP61025 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Cks1bP61025 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Cks1bP61025 Gm9694-201ENSMUST00000193347 1189 ntBASIC11.27□□□□□ -0.61
Cks1bP61025 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cks1bP61025 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cks1bP61025 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cks1bP61025 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Cks1bP61025 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cks1bP61025 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cks1bP61025 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Cks1bP61025 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cks1bP61025 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cks1bP61025 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cks1bP61025 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Cks1bP61025 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cks1bP61025 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cks1bP61025 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Cks1bP61025 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cks1bP61025 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Cks1bP61025 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cks1bP61025 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cks1bP61025 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Cks1bP61025 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cks1bP61025 Dio3-201ENSMUST00000097228 1449 ntBASIC11.26□□□□□ -0.61
Cks1bP61025 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cks1bP61025 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC11.26□□□□□ -0.61
Cks1bP61025 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Cks1bP61025 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Cks1bP61025 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cks1bP61025 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Cks1bP61025 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Cks1bP61025 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cks1bP61025 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC11.26□□□□□ -0.61
Cks1bP61025 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cks1bP61025 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Cks1bP61025 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cks1bP61025 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Cks1bP61025 Gm12933-201ENSMUST00000120203 872 ntBASIC11.26□□□□□ -0.61
Cks1bP61025 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC11.26□□□□□ -0.61
Cks1bP61025 Gm27405-201ENSMUST00000184201 112 ntBASIC11.26□□□□□ -0.61
Cks1bP61025 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cks1bP61025 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Cks1bP61025 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cks1bP61025 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC11.26□□□□□ -0.61
Cks1bP61025 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms