Protein–RNA interactions for Protein: P47993

Xcl1, Lymphotactin, mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xcl1P47993 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC10.32□□□□□ -0.76
Xcl1P47993 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Xcl1P47993 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
Xcl1P47993 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC10.32□□□□□ -0.76
Xcl1P47993 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Xcl1P47993 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Xcl1P47993 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Xcl1P47993 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Xcl1P47993 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Xcl1P47993 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Xcl1P47993 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Xcl1P47993 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Xcl1P47993 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Xcl1P47993 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Xcl1P47993 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
Xcl1P47993 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
Xcl1P47993 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Xcl1P47993 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Xcl1P47993 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Xcl1P47993 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Xcl1P47993 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Xcl1P47993 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Xcl1P47993 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Xcl1P47993 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Xcl1P47993 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Xcl1P47993 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Xcl1P47993 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Xcl1P47993 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Xcl1P47993 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC10.31□□□□□ -0.76
Xcl1P47993 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Xcl1P47993 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Xcl1P47993 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Xcl1P47993 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Xcl1P47993 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC10.31□□□□□ -0.76
Xcl1P47993 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC10.31□□□□□ -0.76
Xcl1P47993 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Xcl1P47993 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC10.31□□□□□ -0.76
Xcl1P47993 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
Xcl1P47993 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Xcl1P47993 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Xcl1P47993 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Xcl1P47993 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC10.31□□□□□ -0.76
Xcl1P47993 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Xcl1P47993 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Xcl1P47993 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Xcl1P47993 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Xcl1P47993 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Xcl1P47993 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC10.31□□□□□ -0.76
Xcl1P47993 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Xcl1P47993 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Xcl1P47993 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Xcl1P47993 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Xcl1P47993 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Xcl1P47993 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Xcl1P47993 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Xcl1P47993 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
Xcl1P47993 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Xcl1P47993 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Xcl1P47993 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Xcl1P47993 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Xcl1P47993 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Xcl1P47993 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Xcl1P47993 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Xcl1P47993 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
Xcl1P47993 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Xcl1P47993 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Xcl1P47993 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Xcl1P47993 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Xcl1P47993 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC10.3□□□□□ -0.76
Xcl1P47993 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Xcl1P47993 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
Xcl1P47993 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Xcl1P47993 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC10.3□□□□□ -0.76
Xcl1P47993 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Xcl1P47993 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC10.3□□□□□ -0.76
Xcl1P47993 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Xcl1P47993 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Xcl1P47993 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
Xcl1P47993 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC10.3□□□□□ -0.76
Xcl1P47993 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Xcl1P47993 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Xcl1P47993 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Xcl1P47993 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC10.3□□□□□ -0.76
Xcl1P47993 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Xcl1P47993 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC10.3□□□□□ -0.76
Xcl1P47993 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC10.3□□□□□ -0.76
Xcl1P47993 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC10.3□□□□□ -0.76
Xcl1P47993 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
Xcl1P47993 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Xcl1P47993 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Xcl1P47993 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Xcl1P47993 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC10.3□□□□□ -0.76
Xcl1P47993 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Xcl1P47993 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Xcl1P47993 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Xcl1P47993 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC10.3□□□□□ -0.76
Xcl1P47993 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC10.3□□□□□ -0.76
Xcl1P47993 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC10.3□□□□□ -0.76
Xcl1P47993 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Xcl1P47993 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms