Protein–RNA interactions for Protein: P39749

Fen1, Flap endonuclease 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fen1P39749 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Fen1P39749 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC15.93■□□□□ 0.14
Fen1P39749 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Fen1P39749 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Fen1P39749 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Fen1P39749 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Fen1P39749 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Fen1P39749 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Fen1P39749 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC15.92■□□□□ 0.14
Fen1P39749 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Fen1P39749 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Fen1P39749 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Fen1P39749 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Fen1P39749 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Fen1P39749 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC15.92■□□□□ 0.14
Fen1P39749 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Fen1P39749 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC15.92■□□□□ 0.14
Fen1P39749 Arhgef4-208ENSMUST00000211073 171 ntBASIC15.92■□□□□ 0.14
Fen1P39749 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC15.92■□□□□ 0.14
Fen1P39749 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Fen1P39749 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
Fen1P39749 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC15.92■□□□□ 0.14
Fen1P39749 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Fen1P39749 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Fen1P39749 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Fen1P39749 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Fen1P39749 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Fen1P39749 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Fen1P39749 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC15.92■□□□□ 0.14
Fen1P39749 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Fen1P39749 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Fen1P39749 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Fen1P39749 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Fen1P39749 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Fen1P39749 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Fen1P39749 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Fen1P39749 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Fen1P39749 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Fen1P39749 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Fen1P39749 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Fen1P39749 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Fen1P39749 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC15.91■□□□□ 0.14
Fen1P39749 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Fen1P39749 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Fen1P39749 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Fen1P39749 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC15.91■□□□□ 0.14
Fen1P39749 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Fen1P39749 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Fen1P39749 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Fen1P39749 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Fen1P39749 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Fen1P39749 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Fen1P39749 Gm4217-201ENSMUST00000182243 1002 ntBASIC15.91■□□□□ 0.14
Fen1P39749 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC15.91■□□□□ 0.14
Fen1P39749 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Fen1P39749 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Fen1P39749 Gm3375-201ENSMUST00000203929 796 ntBASIC15.91■□□□□ 0.14
Fen1P39749 Gm18115-201ENSMUST00000221209 621 ntBASIC15.91■□□□□ 0.14
Fen1P39749 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Fen1P39749 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Fen1P39749 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Fen1P39749 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Fen1P39749 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Fen1P39749 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Fen1P39749 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Fen1P39749 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Fen1P39749 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC15.91■□□□□ 0.14
Fen1P39749 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC15.91■□□□□ 0.14
Fen1P39749 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Fen1P39749 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Fen1P39749 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Fen1P39749 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Fen1P39749 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Fen1P39749 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
Fen1P39749 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Fen1P39749 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Fen1P39749 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Fen1P39749 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Fen1P39749 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Fen1P39749 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Fen1P39749 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC15.9■□□□□ 0.14
Fen1P39749 Gm9484-201ENSMUST00000195892 1159 ntBASIC15.9■□□□□ 0.14
Fen1P39749 Gm43353-201ENSMUST00000199224 1295 ntBASIC15.9■□□□□ 0.14
Fen1P39749 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Fen1P39749 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Fen1P39749 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Fen1P39749 Gm5417-201ENSMUST00000079706 384 ntBASIC15.9■□□□□ 0.14
Fen1P39749 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Fen1P39749 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Fen1P39749 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Fen1P39749 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Fen1P39749 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC15.9■□□□□ 0.14
Fen1P39749 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Fen1P39749 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Fen1P39749 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Fen1P39749 Gm44729-201ENSMUST00000206759 2052 ntBASIC15.9■□□□□ 0.14
Fen1P39749 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Fen1P39749 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Fen1P39749 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Fen1P39749 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms