Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC14.24□□□□□ -0.13
Pcdh1F7BJK1 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
Pcdh1F7BJK1 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC14.24□□□□□ -0.13
Pcdh1F7BJK1 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdh1F7BJK1 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
Pcdh1F7BJK1 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC14.24□□□□□ -0.13
Pcdh1F7BJK1 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdh1F7BJK1 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Pcdh1F7BJK1 Gm9484-201ENSMUST00000195892 1159 ntBASIC14.24□□□□□ -0.13
Pcdh1F7BJK1 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Pcdh1F7BJK1 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC14.24□□□□□ -0.13
Pcdh1F7BJK1 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Pcdh1F7BJK1 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdh1F7BJK1 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdh1F7BJK1 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdh1F7BJK1 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdh1F7BJK1 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdh1F7BJK1 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdh1F7BJK1 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdh1F7BJK1 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdh1F7BJK1 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdh1F7BJK1 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdh1F7BJK1 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdh1F7BJK1 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdh1F7BJK1 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdh1F7BJK1 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdh1F7BJK1 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC14.23□□□□□ -0.13
Pcdh1F7BJK1 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdh1F7BJK1 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdh1F7BJK1 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdh1F7BJK1 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC14.23□□□□□ -0.13
Pcdh1F7BJK1 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Pcdh1F7BJK1 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC14.23□□□□□ -0.13
Pcdh1F7BJK1 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdh1F7BJK1 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdh1F7BJK1 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdh1F7BJK1 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdh1F7BJK1 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC14.23□□□□□ -0.13
Pcdh1F7BJK1 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdh1F7BJK1 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdh1F7BJK1 AC174678.1-201ENSMUST00000228007 2749 ntBASIC14.23□□□□□ -0.13
Pcdh1F7BJK1 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC14.23□□□□□ -0.13
Pcdh1F7BJK1 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdh1F7BJK1 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC14.23□□□□□ -0.13
Pcdh1F7BJK1 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC14.23□□□□□ -0.13
Pcdh1F7BJK1 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdh1F7BJK1 Gm11960-202ENSMUST00000181063 2858 ntBASIC14.23□□□□□ -0.13
Pcdh1F7BJK1 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdh1F7BJK1 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdh1F7BJK1 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdh1F7BJK1 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdh1F7BJK1 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdh1F7BJK1 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdh1F7BJK1 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Pcdh1F7BJK1 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdh1F7BJK1 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdh1F7BJK1 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdh1F7BJK1 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdh1F7BJK1 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdh1F7BJK1 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Pcdh1F7BJK1 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdh1F7BJK1 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdh1F7BJK1 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdh1F7BJK1 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdh1F7BJK1 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdh1F7BJK1 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdh1F7BJK1 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdh1F7BJK1 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC14.22□□□□□ -0.13
Pcdh1F7BJK1 Gm26039-201ENSMUST00000158152 144 ntBASIC14.22□□□□□ -0.13
Pcdh1F7BJK1 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdh1F7BJK1 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdh1F7BJK1 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC14.22□□□□□ -0.13
Pcdh1F7BJK1 Gm20472-201ENSMUST00000174403 1240 ntBASIC14.22□□□□□ -0.13
Pcdh1F7BJK1 Mir1668-201ENSMUST00000184114 107 ntBASIC14.22□□□□□ -0.13
Pcdh1F7BJK1 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdh1F7BJK1 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdh1F7BJK1 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdh1F7BJK1 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Pcdh1F7BJK1 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdh1F7BJK1 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdh1F7BJK1 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Pcdh1F7BJK1 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdh1F7BJK1 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdh1F7BJK1 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdh1F7BJK1 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdh1F7BJK1 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdh1F7BJK1 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Pcdh1F7BJK1 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdh1F7BJK1 Gm9889-202ENSMUST00000206983 1577 ntBASIC14.22□□□□□ -0.13
Pcdh1F7BJK1 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdh1F7BJK1 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdh1F7BJK1 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC14.21□□□□□ -0.13
Pcdh1F7BJK1 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
Pcdh1F7BJK1 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdh1F7BJK1 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdh1F7BJK1 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdh1F7BJK1 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.13
Pcdh1F7BJK1 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC14.21□□□□□ -0.13
Pcdh1F7BJK1 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.13
Pcdh1F7BJK1 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms