Protein–RNA interactions for Protein: A0A140T8M6

Igkv3-5, Immunoglobulin kappa chain variable 3-5 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv3-5A0A140T8M6 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Igkv3-5A0A140T8M6 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Igkv3-5A0A140T8M6 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
Igkv3-5A0A140T8M6 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Igkv3-5A0A140T8M6 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC9.94□□□□□ -0.82
Igkv3-5A0A140T8M6 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Igkv3-5A0A140T8M6 Gm11336-201ENSMUST00000118168 334 ntBASIC9.94□□□□□ -0.82
Igkv3-5A0A140T8M6 Mir5130-201ENSMUST00000175160 84 ntBASIC9.94□□□□□ -0.82
Igkv3-5A0A140T8M6 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Igkv3-5A0A140T8M6 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC9.94□□□□□ -0.82
Igkv3-5A0A140T8M6 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC9.94□□□□□ -0.82
Igkv3-5A0A140T8M6 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC9.94□□□□□ -0.82
Igkv3-5A0A140T8M6 AC122351.1-201ENSMUST00000220467 126 ntBASIC9.94□□□□□ -0.82
Igkv3-5A0A140T8M6 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Igkv3-5A0A140T8M6 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Igkv3-5A0A140T8M6 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Igkv3-5A0A140T8M6 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Igkv3-5A0A140T8M6 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
Igkv3-5A0A140T8M6 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Igkv3-5A0A140T8M6 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC9.94□□□□□ -0.82
Igkv3-5A0A140T8M6 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Igkv3-5A0A140T8M6 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Igkv3-5A0A140T8M6 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Igkv3-5A0A140T8M6 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Igkv3-5A0A140T8M6 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Igkv3-5A0A140T8M6 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
Igkv3-5A0A140T8M6 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Igkv3-5A0A140T8M6 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC9.94□□□□□ -0.82
Igkv3-5A0A140T8M6 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Igkv3-5A0A140T8M6 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Igkv3-5A0A140T8M6 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Igkv3-5A0A140T8M6 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Igkv3-5A0A140T8M6 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Igkv3-5A0A140T8M6 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Igkv3-5A0A140T8M6 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Igkv3-5A0A140T8M6 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Igkv3-5A0A140T8M6 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Igkv3-5A0A140T8M6 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Igkv3-5A0A140T8M6 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Igkv3-5A0A140T8M6 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Igkv3-5A0A140T8M6 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Igkv3-5A0A140T8M6 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Igkv3-5A0A140T8M6 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Igkv3-5A0A140T8M6 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Igkv3-5A0A140T8M6 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC9.93□□□□□ -0.82
Igkv3-5A0A140T8M6 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Igkv3-5A0A140T8M6 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Igkv3-5A0A140T8M6 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Igkv3-5A0A140T8M6 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Igkv3-5A0A140T8M6 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC9.93□□□□□ -0.82
Igkv3-5A0A140T8M6 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC9.93□□□□□ -0.82
Igkv3-5A0A140T8M6 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC9.93□□□□□ -0.82
Igkv3-5A0A140T8M6 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC9.93□□□□□ -0.82
Igkv3-5A0A140T8M6 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC9.93□□□□□ -0.82
Igkv3-5A0A140T8M6 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC9.93□□□□□ -0.82
Igkv3-5A0A140T8M6 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Igkv3-5A0A140T8M6 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Igkv3-5A0A140T8M6 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC9.93□□□□□ -0.82
Igkv3-5A0A140T8M6 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Igkv3-5A0A140T8M6 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Igkv3-5A0A140T8M6 Gm7370-201ENSMUST00000219471 767 ntBASIC9.93□□□□□ -0.82
Igkv3-5A0A140T8M6 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Igkv3-5A0A140T8M6 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Igkv3-5A0A140T8M6 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Igkv3-5A0A140T8M6 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Igkv3-5A0A140T8M6 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Igkv3-5A0A140T8M6 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Igkv3-5A0A140T8M6 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Igkv3-5A0A140T8M6 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Igkv3-5A0A140T8M6 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
Igkv3-5A0A140T8M6 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
Igkv3-5A0A140T8M6 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Igkv3-5A0A140T8M6 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Igkv3-5A0A140T8M6 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Igkv3-5A0A140T8M6 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Igkv3-5A0A140T8M6 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC9.93□□□□□ -0.82
Igkv3-5A0A140T8M6 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC9.93□□□□□ -0.82
Igkv3-5A0A140T8M6 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Igkv3-5A0A140T8M6 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Igkv3-5A0A140T8M6 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Igkv3-5A0A140T8M6 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Igkv3-5A0A140T8M6 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Igkv3-5A0A140T8M6 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC9.92□□□□□ -0.82
Igkv3-5A0A140T8M6 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC9.92□□□□□ -0.82
Igkv3-5A0A140T8M6 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Igkv3-5A0A140T8M6 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
Igkv3-5A0A140T8M6 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Igkv3-5A0A140T8M6 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
Igkv3-5A0A140T8M6 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Igkv3-5A0A140T8M6 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Igkv3-5A0A140T8M6 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC9.92□□□□□ -0.82
Igkv3-5A0A140T8M6 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Igkv3-5A0A140T8M6 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Igkv3-5A0A140T8M6 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Igkv3-5A0A140T8M6 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC9.92□□□□□ -0.82
Igkv3-5A0A140T8M6 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC9.92□□□□□ -0.82
Igkv3-5A0A140T8M6 Gm20472-201ENSMUST00000174403 1240 ntBASIC9.92□□□□□ -0.82
Igkv3-5A0A140T8M6 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Igkv3-5A0A140T8M6 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC9.92□□□□□ -0.82
Igkv3-5A0A140T8M6 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms