Protein–RNA interactions for Protein: A0A075B633

Trav8n-2, T cell receptor alpha variable 8n-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8n-2A0A075B633 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
Trav8n-2A0A075B633 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC14.41□□□□□ -0.1
Trav8n-2A0A075B633 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Trav8n-2A0A075B633 Mir6956-201ENSMUST00000183598 62 ntBASIC14.41□□□□□ -0.1
Trav8n-2A0A075B633 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC14.41□□□□□ -0.1
Trav8n-2A0A075B633 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC14.41□□□□□ -0.1
Trav8n-2A0A075B633 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC14.41□□□□□ -0.1
Trav8n-2A0A075B633 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trav8n-2A0A075B633 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav8n-2A0A075B633 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Trav8n-2A0A075B633 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav8n-2A0A075B633 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav8n-2A0A075B633 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav8n-2A0A075B633 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC14.41□□□□□ -0.1
Trav8n-2A0A075B633 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trav8n-2A0A075B633 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav8n-2A0A075B633 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav8n-2A0A075B633 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Trav8n-2A0A075B633 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav8n-2A0A075B633 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav8n-2A0A075B633 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav8n-2A0A075B633 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav8n-2A0A075B633 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav8n-2A0A075B633 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav8n-2A0A075B633 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav8n-2A0A075B633 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav8n-2A0A075B633 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC14.4□□□□□ -0.1
Trav8n-2A0A075B633 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav8n-2A0A075B633 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav8n-2A0A075B633 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav8n-2A0A075B633 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trav8n-2A0A075B633 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trav8n-2A0A075B633 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trav8n-2A0A075B633 Gm17968-201ENSMUST00000194902 784 ntBASIC14.4□□□□□ -0.1
Trav8n-2A0A075B633 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC14.4□□□□□ -0.1
Trav8n-2A0A075B633 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trav8n-2A0A075B633 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav8n-2A0A075B633 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Trav8n-2A0A075B633 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Trav8n-2A0A075B633 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav8n-2A0A075B633 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav8n-2A0A075B633 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trav8n-2A0A075B633 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav8n-2A0A075B633 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav8n-2A0A075B633 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Trav8n-2A0A075B633 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav8n-2A0A075B633 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav8n-2A0A075B633 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav8n-2A0A075B633 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trav8n-2A0A075B633 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav8n-2A0A075B633 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav8n-2A0A075B633 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav8n-2A0A075B633 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav8n-2A0A075B633 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav8n-2A0A075B633 Gm36858-201ENSMUST00000194501 2391 ntBASIC14.39□□□□□ -0.11
Trav8n-2A0A075B633 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav8n-2A0A075B633 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav8n-2A0A075B633 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trav8n-2A0A075B633 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC14.39□□□□□ -0.11
Trav8n-2A0A075B633 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC14.39□□□□□ -0.11
Trav8n-2A0A075B633 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trav8n-2A0A075B633 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Trav8n-2A0A075B633 Gm15427-201ENSMUST00000117288 531 ntBASIC14.39□□□□□ -0.11
Trav8n-2A0A075B633 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC14.39□□□□□ -0.11
Trav8n-2A0A075B633 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC14.39□□□□□ -0.11
Trav8n-2A0A075B633 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trav8n-2A0A075B633 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC14.39□□□□□ -0.11
Trav8n-2A0A075B633 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC14.39□□□□□ -0.11
Trav8n-2A0A075B633 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav8n-2A0A075B633 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trav8n-2A0A075B633 AC158538.2-201ENSMUST00000225455 906 ntBASIC14.39□□□□□ -0.11
Trav8n-2A0A075B633 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Trav8n-2A0A075B633 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
Trav8n-2A0A075B633 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav8n-2A0A075B633 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Trav8n-2A0A075B633 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trav8n-2A0A075B633 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav8n-2A0A075B633 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC14.39□□□□□ -0.11
Trav8n-2A0A075B633 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Trav8n-2A0A075B633 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trav8n-2A0A075B633 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Trav8n-2A0A075B633 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trav8n-2A0A075B633 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav8n-2A0A075B633 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav8n-2A0A075B633 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav8n-2A0A075B633 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav8n-2A0A075B633 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav8n-2A0A075B633 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav8n-2A0A075B633 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Trav8n-2A0A075B633 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav8n-2A0A075B633 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trav8n-2A0A075B633 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav8n-2A0A075B633 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav8n-2A0A075B633 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav8n-2A0A075B633 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC14.38□□□□□ -0.11
Trav8n-2A0A075B633 Gm13597-201ENSMUST00000121239 375 ntBASIC14.38□□□□□ -0.11
Trav8n-2A0A075B633 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav8n-2A0A075B633 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trav8n-2A0A075B633 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav8n-2A0A075B633 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms