Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Gm20949-201ENSMUST00000206478 952 ntBASIC16.63■□□□□ 0.25
Clp1Q99LI9 AC127302.2-201ENSMUST00000215212 268 ntBASIC16.63■□□□□ 0.25
Clp1Q99LI9 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Clp1Q99LI9 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC16.63■□□□□ 0.25
Clp1Q99LI9 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Clp1Q99LI9 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Clp1Q99LI9 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Clp1Q99LI9 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC16.63■□□□□ 0.25
Clp1Q99LI9 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Clp1Q99LI9 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Clp1Q99LI9 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Clp1Q99LI9 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
Clp1Q99LI9 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Clp1Q99LI9 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Clp1Q99LI9 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Clp1Q99LI9 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Clp1Q99LI9 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Clp1Q99LI9 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Clp1Q99LI9 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Clp1Q99LI9 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC16.62■□□□□ 0.25
Clp1Q99LI9 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Clp1Q99LI9 Rprl2-201ENSMUST00000157150 290 ntBASIC16.62■□□□□ 0.25
Clp1Q99LI9 Gm18889-201ENSMUST00000174284 929 ntBASIC16.62■□□□□ 0.25
Clp1Q99LI9 Mir7023-201ENSMUST00000185093 64 ntBASIC16.62■□□□□ 0.25
Clp1Q99LI9 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Clp1Q99LI9 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
Clp1Q99LI9 AC140397.2-201ENSMUST00000224213 834 ntBASIC16.62■□□□□ 0.25
Clp1Q99LI9 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Clp1Q99LI9 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Clp1Q99LI9 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Clp1Q99LI9 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Clp1Q99LI9 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Clp1Q99LI9 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Clp1Q99LI9 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Clp1Q99LI9 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC16.62■□□□□ 0.25
Clp1Q99LI9 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Clp1Q99LI9 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Clp1Q99LI9 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC16.61■□□□□ 0.25
Clp1Q99LI9 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Clp1Q99LI9 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Clp1Q99LI9 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Clp1Q99LI9 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Clp1Q99LI9 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Clp1Q99LI9 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Clp1Q99LI9 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC16.61■□□□□ 0.25
Clp1Q99LI9 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC16.61■□□□□ 0.25
Clp1Q99LI9 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC16.61■□□□□ 0.25
Clp1Q99LI9 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC16.61■□□□□ 0.25
Clp1Q99LI9 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Clp1Q99LI9 Gm18246-201ENSMUST00000221023 728 ntBASIC16.61■□□□□ 0.25
Clp1Q99LI9 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Clp1Q99LI9 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Clp1Q99LI9 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC16.61■□□□□ 0.25
Clp1Q99LI9 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Clp1Q99LI9 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Clp1Q99LI9 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Clp1Q99LI9 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC16.61■□□□□ 0.25
Clp1Q99LI9 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Clp1Q99LI9 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Clp1Q99LI9 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Clp1Q99LI9 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Clp1Q99LI9 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Clp1Q99LI9 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Clp1Q99LI9 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Clp1Q99LI9 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Clp1Q99LI9 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
Clp1Q99LI9 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC16.6■□□□□ 0.25
Clp1Q99LI9 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Clp1Q99LI9 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Clp1Q99LI9 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Clp1Q99LI9 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Clp1Q99LI9 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC16.6■□□□□ 0.25
Clp1Q99LI9 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Clp1Q99LI9 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Clp1Q99LI9 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Clp1Q99LI9 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Clp1Q99LI9 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Clp1Q99LI9 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC16.6■□□□□ 0.25
Clp1Q99LI9 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC16.6■□□□□ 0.25
Clp1Q99LI9 Rpph1-201ENSMUST00000175096 319 ntBASIC16.6■□□□□ 0.25
Clp1Q99LI9 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Clp1Q99LI9 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Clp1Q99LI9 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Clp1Q99LI9 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC16.6■□□□□ 0.25
Clp1Q99LI9 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Clp1Q99LI9 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Clp1Q99LI9 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Clp1Q99LI9 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Clp1Q99LI9 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Clp1Q99LI9 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Clp1Q99LI9 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Clp1Q99LI9 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Clp1Q99LI9 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Clp1Q99LI9 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Clp1Q99LI9 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC16.59■□□□□ 0.25
Clp1Q99LI9 Gm25948-201ENSMUST00000175334 112 ntBASIC16.59■□□□□ 0.25
Clp1Q99LI9 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC16.59■□□□□ 0.25
Clp1Q99LI9 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Clp1Q99LI9 Gpr146-202ENSMUST00000053120 1040 ntBASIC16.59■□□□□ 0.25
Clp1Q99LI9 Fgf17-202ENSMUST00000227123 1336 ntBASIC16.59■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms