Protein–RNA interactions for Protein: Q8BUP8

Fam43a, Protein FAM43A, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam43aQ8BUP8 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Fam43aQ8BUP8 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Fam43aQ8BUP8 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Fam43aQ8BUP8 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Fam43aQ8BUP8 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
Fam43aQ8BUP8 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC17.69■□□□□ 0.42
Fam43aQ8BUP8 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC17.69■□□□□ 0.42
Fam43aQ8BUP8 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Fam43aQ8BUP8 Gm7213-201ENSMUST00000215977 950 ntBASIC17.69■□□□□ 0.42
Fam43aQ8BUP8 AC158538.1-201ENSMUST00000225870 294 ntBASIC17.69■□□□□ 0.42
Fam43aQ8BUP8 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Fam43aQ8BUP8 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Fam43aQ8BUP8 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Fam43aQ8BUP8 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Fam43aQ8BUP8 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Fam43aQ8BUP8 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Fam43aQ8BUP8 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Fam43aQ8BUP8 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
Fam43aQ8BUP8 Gm43697-201ENSMUST00000199637 2581 ntBASIC17.69■□□□□ 0.42
Fam43aQ8BUP8 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Fam43aQ8BUP8 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Fam43aQ8BUP8 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Fam43aQ8BUP8 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Fam43aQ8BUP8 Gm21451-201ENSMUST00000111062 2775 ntBASIC17.68■□□□□ 0.42
Fam43aQ8BUP8 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Fam43aQ8BUP8 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
Fam43aQ8BUP8 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Fam43aQ8BUP8 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Fam43aQ8BUP8 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Fam43aQ8BUP8 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Fam43aQ8BUP8 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Fam43aQ8BUP8 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Fam43aQ8BUP8 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC17.68■□□□□ 0.42
Fam43aQ8BUP8 Gm29994-201ENSMUST00000195495 1193 ntBASIC17.68■□□□□ 0.42
Fam43aQ8BUP8 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC17.68■□□□□ 0.42
Fam43aQ8BUP8 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Fam43aQ8BUP8 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC17.68■□□□□ 0.42
Fam43aQ8BUP8 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Fam43aQ8BUP8 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Fam43aQ8BUP8 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Fam43aQ8BUP8 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Fam43aQ8BUP8 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Fam43aQ8BUP8 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Fam43aQ8BUP8 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Fam43aQ8BUP8 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC17.68■□□□□ 0.42
Fam43aQ8BUP8 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Fam43aQ8BUP8 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
Fam43aQ8BUP8 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Fam43aQ8BUP8 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Fam43aQ8BUP8 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Fam43aQ8BUP8 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Fam43aQ8BUP8 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Fam43aQ8BUP8 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Fam43aQ8BUP8 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Fam43aQ8BUP8 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC17.67■□□□□ 0.42
Fam43aQ8BUP8 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Fam43aQ8BUP8 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Fam43aQ8BUP8 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Fam43aQ8BUP8 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Fam43aQ8BUP8 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Fam43aQ8BUP8 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Fam43aQ8BUP8 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Fam43aQ8BUP8 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Fam43aQ8BUP8 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Fam43aQ8BUP8 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Fam43aQ8BUP8 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Fam43aQ8BUP8 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Fam43aQ8BUP8 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC17.67■□□□□ 0.42
Fam43aQ8BUP8 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Fam43aQ8BUP8 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Fam43aQ8BUP8 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Fam43aQ8BUP8 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC17.66■□□□□ 0.42
Fam43aQ8BUP8 Gm11841-201ENSMUST00000117060 1963 ntBASIC17.66■□□□□ 0.42
Fam43aQ8BUP8 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Fam43aQ8BUP8 Gm13836-201ENSMUST00000121159 501 ntBASIC17.66■□□□□ 0.42
Fam43aQ8BUP8 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Fam43aQ8BUP8 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
Fam43aQ8BUP8 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC17.66■□□□□ 0.42
Fam43aQ8BUP8 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Fam43aQ8BUP8 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Fam43aQ8BUP8 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC17.66■□□□□ 0.42
Fam43aQ8BUP8 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Fam43aQ8BUP8 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Fam43aQ8BUP8 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Fam43aQ8BUP8 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Fam43aQ8BUP8 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Fam43aQ8BUP8 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Fam43aQ8BUP8 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Fam43aQ8BUP8 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Fam43aQ8BUP8 Asic1-205ENSMUST00000228185 1818 ntBASIC17.65■□□□□ 0.42
Fam43aQ8BUP8 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Fam43aQ8BUP8 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Fam43aQ8BUP8 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Fam43aQ8BUP8 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Fam43aQ8BUP8 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Fam43aQ8BUP8 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Fam43aQ8BUP8 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Fam43aQ8BUP8 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Fam43aQ8BUP8 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Fam43aQ8BUP8 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms