Protein–RNA interactions for Protein: Q61382

Traf4, TNF receptor-associated factor 4, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf4Q61382 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Traf4Q61382 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Traf4Q61382 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Traf4Q61382 Gm12895-201ENSMUST00000122214 226 ntBASIC14.05□□□□□ -0.16
Traf4Q61382 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Traf4Q61382 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Traf4Q61382 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Traf4Q61382 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Traf4Q61382 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Traf4Q61382 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Traf4Q61382 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Traf4Q61382 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Traf4Q61382 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Traf4Q61382 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Traf4Q61382 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Traf4Q61382 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
Traf4Q61382 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Traf4Q61382 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Traf4Q61382 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Traf4Q61382 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Traf4Q61382 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Traf4Q61382 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Traf4Q61382 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Traf4Q61382 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Traf4Q61382 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Traf4Q61382 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Traf4Q61382 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC14.04□□□□□ -0.16
Traf4Q61382 Gm10584-201ENSMUST00000207036 2628 ntBASIC14.04□□□□□ -0.16
Traf4Q61382 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Traf4Q61382 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC14.04□□□□□ -0.16
Traf4Q61382 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Traf4Q61382 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
Traf4Q61382 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Traf4Q61382 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC14.04□□□□□ -0.16
Traf4Q61382 Gm18421-201ENSMUST00000204122 625 ntBASIC14.04□□□□□ -0.16
Traf4Q61382 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC14.04□□□□□ -0.16
Traf4Q61382 AC153889.1-201ENSMUST00000219257 330 ntBASIC14.04□□□□□ -0.16
Traf4Q61382 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Traf4Q61382 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Traf4Q61382 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Traf4Q61382 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Traf4Q61382 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Traf4Q61382 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Traf4Q61382 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Traf4Q61382 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Traf4Q61382 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Traf4Q61382 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Traf4Q61382 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Traf4Q61382 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Traf4Q61382 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Traf4Q61382 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Traf4Q61382 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Traf4Q61382 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Traf4Q61382 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Traf4Q61382 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Traf4Q61382 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Traf4Q61382 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
Traf4Q61382 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Traf4Q61382 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Traf4Q61382 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC14.03□□□□□ -0.16
Traf4Q61382 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC14.03□□□□□ -0.16
Traf4Q61382 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC14.03□□□□□ -0.16
Traf4Q61382 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Traf4Q61382 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Traf4Q61382 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Traf4Q61382 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Traf4Q61382 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Traf4Q61382 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Traf4Q61382 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC14.03□□□□□ -0.16
Traf4Q61382 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Traf4Q61382 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Traf4Q61382 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC14.03□□□□□ -0.16
Traf4Q61382 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Traf4Q61382 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Traf4Q61382 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Traf4Q61382 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Traf4Q61382 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Traf4Q61382 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Traf4Q61382 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Traf4Q61382 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Traf4Q61382 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Traf4Q61382 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Traf4Q61382 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Traf4Q61382 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Traf4Q61382 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Traf4Q61382 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Traf4Q61382 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC14.02□□□□□ -0.17
Traf4Q61382 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Traf4Q61382 Gm27459-201ENSMUST00000184860 107 ntBASIC14.02□□□□□ -0.17
Traf4Q61382 Gm28659-201ENSMUST00000188013 759 ntBASIC14.02□□□□□ -0.17
Traf4Q61382 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC14.02□□□□□ -0.17
Traf4Q61382 Mzt1-203ENSMUST00000227948 952 ntBASIC14.02□□□□□ -0.17
Traf4Q61382 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Traf4Q61382 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Traf4Q61382 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Traf4Q61382 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Traf4Q61382 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Traf4Q61382 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Traf4Q61382 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Traf4Q61382 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms