Protein–RNA interactions for Protein: Q4U2R1

Herc2, E3 ubiquitin-protein ligase HERC2, mousemouse

Predictions only

Length 4,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc2Q4U2R1 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Herc2Q4U2R1 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC9.31□□□□□ -0.92
Herc2Q4U2R1 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC9.31□□□□□ -0.92
Herc2Q4U2R1 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC9.31□□□□□ -0.92
Herc2Q4U2R1 Gm7584-201ENSMUST00000175829 940 ntBASIC9.31□□□□□ -0.92
Herc2Q4U2R1 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC9.31□□□□□ -0.92
Herc2Q4U2R1 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC9.31□□□□□ -0.92
Herc2Q4U2R1 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Herc2Q4U2R1 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Herc2Q4U2R1 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Herc2Q4U2R1 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Herc2Q4U2R1 Wnt10b-206ENSMUST00000228546 2709 ntBASIC9.31□□□□□ -0.92
Herc2Q4U2R1 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Herc2Q4U2R1 Gm5320-201ENSMUST00000207163 1519 ntBASIC9.31□□□□□ -0.92
Herc2Q4U2R1 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC9.31□□□□□ -0.92
Herc2Q4U2R1 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC9.31□□□□□ -0.92
Herc2Q4U2R1 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC9.31□□□□□ -0.92
Herc2Q4U2R1 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC9.31□□□□□ -0.92
Herc2Q4U2R1 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Herc2Q4U2R1 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC9.31□□□□□ -0.92
Herc2Q4U2R1 AC158538.2-201ENSMUST00000225455 906 ntBASIC9.31□□□□□ -0.92
Herc2Q4U2R1 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Herc2Q4U2R1 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Herc2Q4U2R1 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Herc2Q4U2R1 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC9.3□□□□□ -0.92
Herc2Q4U2R1 Gm5187-201ENSMUST00000117317 991 ntBASIC9.3□□□□□ -0.92
Herc2Q4U2R1 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC9.3□□□□□ -0.92
Herc2Q4U2R1 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC9.3□□□□□ -0.92
Herc2Q4U2R1 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Herc2Q4U2R1 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC9.3□□□□□ -0.92
Herc2Q4U2R1 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Herc2Q4U2R1 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Herc2Q4U2R1 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Herc2Q4U2R1 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC9.3□□□□□ -0.92
Herc2Q4U2R1 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Herc2Q4U2R1 Gm23931-201ENSMUST00000103842 109 ntBASIC9.3□□□□□ -0.92
Herc2Q4U2R1 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC9.3□□□□□ -0.92
Herc2Q4U2R1 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Herc2Q4U2R1 Gm8835-201ENSMUST00000173096 1169 ntBASIC9.3□□□□□ -0.92
Herc2Q4U2R1 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Herc2Q4U2R1 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Herc2Q4U2R1 Gm8801-201ENSMUST00000173255 1064 ntBASIC9.3□□□□□ -0.92
Herc2Q4U2R1 Mir7032-201ENSMUST00000185154 79 ntBASIC9.3□□□□□ -0.92
Herc2Q4U2R1 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Herc2Q4U2R1 AC110817.1-201ENSMUST00000225706 605 ntBASIC9.3□□□□□ -0.92
Herc2Q4U2R1 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC9.3□□□□□ -0.92
Herc2Q4U2R1 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC9.3□□□□□ -0.92
Herc2Q4U2R1 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Herc2Q4U2R1 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Herc2Q4U2R1 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Herc2Q4U2R1 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Herc2Q4U2R1 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Herc2Q4U2R1 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Herc2Q4U2R1 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Herc2Q4U2R1 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Herc2Q4U2R1 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Herc2Q4U2R1 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Herc2Q4U2R1 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Herc2Q4U2R1 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Herc2Q4U2R1 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Herc2Q4U2R1 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Herc2Q4U2R1 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Herc2Q4U2R1 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Herc2Q4U2R1 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Herc2Q4U2R1 Gm43068-201ENSMUST00000201095 1273 ntBASIC9.29□□□□□ -0.92
Herc2Q4U2R1 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC9.29□□□□□ -0.92
Herc2Q4U2R1 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC9.29□□□□□ -0.92
Herc2Q4U2R1 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Herc2Q4U2R1 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Herc2Q4U2R1 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Herc2Q4U2R1 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Herc2Q4U2R1 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC9.29□□□□□ -0.92
Herc2Q4U2R1 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Herc2Q4U2R1 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC9.29□□□□□ -0.92
Herc2Q4U2R1 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Herc2Q4U2R1 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Herc2Q4U2R1 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Herc2Q4U2R1 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Herc2Q4U2R1 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Herc2Q4U2R1 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC9.29□□□□□ -0.92
Herc2Q4U2R1 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Herc2Q4U2R1 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC9.29□□□□□ -0.92
Herc2Q4U2R1 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Herc2Q4U2R1 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Herc2Q4U2R1 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC9.29□□□□□ -0.92
Herc2Q4U2R1 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Herc2Q4U2R1 AC155252.1-201ENSMUST00000226462 1208 ntBASIC9.29□□□□□ -0.92
Herc2Q4U2R1 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Herc2Q4U2R1 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Herc2Q4U2R1 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Herc2Q4U2R1 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC9.29□□□□□ -0.92
Herc2Q4U2R1 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Herc2Q4U2R1 Gm4993-201ENSMUST00000118719 1174 ntBASIC9.29□□□□□ -0.92
Herc2Q4U2R1 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC9.29□□□□□ -0.92
Herc2Q4U2R1 Gm6244-201ENSMUST00000178732 841 ntBASIC9.29□□□□□ -0.92
Herc2Q4U2R1 Mir6392-201ENSMUST00000184924 108 ntBASIC9.29□□□□□ -0.92
Herc2Q4U2R1 AC132317.1-201ENSMUST00000227227 962 ntBASIC9.29□□□□□ -0.92
Herc2Q4U2R1 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC9.28□□□□□ -0.92
Herc2Q4U2R1 Gm14723-201ENSMUST00000118686 215 ntBASIC9.28□□□□□ -0.92
Herc2Q4U2R1 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC9.28□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms