Protein–RNA interactions for Protein: Q3UPR0

Shisa3, Protein shisa-3 homolog, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa3Q3UPR0 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Shisa3Q3UPR0 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Shisa3Q3UPR0 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Shisa3Q3UPR0 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Shisa3Q3UPR0 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Shisa3Q3UPR0 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Shisa3Q3UPR0 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Shisa3Q3UPR0 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Shisa3Q3UPR0 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC13.69□□□□□ -0.22
Shisa3Q3UPR0 Gm18959-201ENSMUST00000208954 655 ntBASIC13.69□□□□□ -0.22
Shisa3Q3UPR0 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
Shisa3Q3UPR0 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Shisa3Q3UPR0 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Shisa3Q3UPR0 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Shisa3Q3UPR0 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Shisa3Q3UPR0 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Shisa3Q3UPR0 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Shisa3Q3UPR0 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Shisa3Q3UPR0 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Shisa3Q3UPR0 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Shisa3Q3UPR0 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Shisa3Q3UPR0 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Shisa3Q3UPR0 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Shisa3Q3UPR0 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC13.69□□□□□ -0.22
Shisa3Q3UPR0 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Shisa3Q3UPR0 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Shisa3Q3UPR0 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Shisa3Q3UPR0 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Shisa3Q3UPR0 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Shisa3Q3UPR0 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Shisa3Q3UPR0 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Shisa3Q3UPR0 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Shisa3Q3UPR0 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Shisa3Q3UPR0 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Shisa3Q3UPR0 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Shisa3Q3UPR0 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Shisa3Q3UPR0 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Shisa3Q3UPR0 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC13.68□□□□□ -0.22
Shisa3Q3UPR0 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Shisa3Q3UPR0 Gm13186-201ENSMUST00000118031 316 ntBASIC13.68□□□□□ -0.22
Shisa3Q3UPR0 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Shisa3Q3UPR0 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC13.68□□□□□ -0.22
Shisa3Q3UPR0 Gm10231-201ENSMUST00000181584 441 ntBASIC13.68□□□□□ -0.22
Shisa3Q3UPR0 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Shisa3Q3UPR0 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Shisa3Q3UPR0 Gm10175-202ENSMUST00000208752 441 ntBASIC13.68□□□□□ -0.22
Shisa3Q3UPR0 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Shisa3Q3UPR0 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Shisa3Q3UPR0 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Shisa3Q3UPR0 Phf7-203ENSMUST00000226565 1971 ntBASIC13.68□□□□□ -0.22
Shisa3Q3UPR0 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Shisa3Q3UPR0 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Shisa3Q3UPR0 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Shisa3Q3UPR0 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Shisa3Q3UPR0 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Shisa3Q3UPR0 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Shisa3Q3UPR0 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Shisa3Q3UPR0 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC13.68□□□□□ -0.22
Shisa3Q3UPR0 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Shisa3Q3UPR0 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Shisa3Q3UPR0 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Shisa3Q3UPR0 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Shisa3Q3UPR0 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Shisa3Q3UPR0 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Shisa3Q3UPR0 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Shisa3Q3UPR0 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Shisa3Q3UPR0 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Shisa3Q3UPR0 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Shisa3Q3UPR0 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Shisa3Q3UPR0 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Shisa3Q3UPR0 Mir5130-201ENSMUST00000175160 84 ntBASIC13.67□□□□□ -0.22
Shisa3Q3UPR0 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Shisa3Q3UPR0 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Shisa3Q3UPR0 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC13.67□□□□□ -0.22
Shisa3Q3UPR0 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Shisa3Q3UPR0 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC13.67□□□□□ -0.22
Shisa3Q3UPR0 AC121577.1-201ENSMUST00000227302 707 ntBASIC13.67□□□□□ -0.22
Shisa3Q3UPR0 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Shisa3Q3UPR0 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Shisa3Q3UPR0 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Shisa3Q3UPR0 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC13.67□□□□□ -0.22
Shisa3Q3UPR0 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Shisa3Q3UPR0 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Shisa3Q3UPR0 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Shisa3Q3UPR0 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Shisa3Q3UPR0 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Shisa3Q3UPR0 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Shisa3Q3UPR0 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Shisa3Q3UPR0 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Shisa3Q3UPR0 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC13.67□□□□□ -0.22
Shisa3Q3UPR0 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Shisa3Q3UPR0 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Shisa3Q3UPR0 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Shisa3Q3UPR0 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Shisa3Q3UPR0 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Shisa3Q3UPR0 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Shisa3Q3UPR0 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Shisa3Q3UPR0 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Shisa3Q3UPR0 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC13.66□□□□□ -0.22
Shisa3Q3UPR0 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms