Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC19.82■□□□□ 0.76
Nkx2-3P97334 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC19.82■□□□□ 0.76
Nkx2-3P97334 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Nkx2-3P97334 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Nkx2-3P97334 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Nkx2-3P97334 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Nkx2-3P97334 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Nkx2-3P97334 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Nkx2-3P97334 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC19.81■□□□□ 0.76
Nkx2-3P97334 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Nkx2-3P97334 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Nkx2-3P97334 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Nkx2-3P97334 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Nkx2-3P97334 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Nkx2-3P97334 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
Nkx2-3P97334 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC19.81■□□□□ 0.76
Nkx2-3P97334 Rpph1-201ENSMUST00000175096 319 ntBASIC19.81■□□□□ 0.76
Nkx2-3P97334 Gm7286-201ENSMUST00000182691 1007 ntBASIC19.81■□□□□ 0.76
Nkx2-3P97334 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC19.81■□□□□ 0.76
Nkx2-3P97334 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Nkx2-3P97334 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC19.81■□□□□ 0.76
Nkx2-3P97334 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Nkx2-3P97334 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC19.81■□□□□ 0.76
Nkx2-3P97334 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Nkx2-3P97334 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Nkx2-3P97334 Gm29361-201ENSMUST00000183323 2000 ntBASIC19.8■□□□□ 0.76
Nkx2-3P97334 Gm13337-201ENSMUST00000119183 1594 ntBASIC19.8■□□□□ 0.76
Nkx2-3P97334 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC19.8■□□□□ 0.76
Nkx2-3P97334 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Nkx2-3P97334 Gm16198-201ENSMUST00000118766 670 ntBASIC19.8■□□□□ 0.76
Nkx2-3P97334 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC19.8■□□□□ 0.76
Nkx2-3P97334 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC19.8■□□□□ 0.76
Nkx2-3P97334 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Nkx2-3P97334 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Nkx2-3P97334 Mir7036b-201ENSMUST00000184791 63 ntBASIC19.8■□□□□ 0.76
Nkx2-3P97334 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC19.8■□□□□ 0.76
Nkx2-3P97334 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC19.8■□□□□ 0.76
Nkx2-3P97334 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
Nkx2-3P97334 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Nkx2-3P97334 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Nkx2-3P97334 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC19.8■□□□□ 0.76
Nkx2-3P97334 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Nkx2-3P97334 Gm7669-201ENSMUST00000210184 1603 ntBASIC19.8■□□□□ 0.76
Nkx2-3P97334 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
Nkx2-3P97334 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC19.79■□□□□ 0.76
Nkx2-3P97334 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Nkx2-3P97334 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Nkx2-3P97334 AC130669.1-201ENSMUST00000228537 1672 ntBASIC19.79■□□□□ 0.76
Nkx2-3P97334 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Nkx2-3P97334 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC19.79■□□□□ 0.76
Nkx2-3P97334 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Nkx2-3P97334 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Nkx2-3P97334 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Nkx2-3P97334 Gm8318-201ENSMUST00000182954 872 ntBASIC19.79■□□□□ 0.76
Nkx2-3P97334 Thap2-203ENSMUST00000218989 527 ntBASIC19.79■□□□□ 0.76
Nkx2-3P97334 AC158982.1-201ENSMUST00000228377 901 ntBASIC19.79■□□□□ 0.76
Nkx2-3P97334 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Nkx2-3P97334 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Nkx2-3P97334 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Nkx2-3P97334 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Nkx2-3P97334 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Nkx2-3P97334 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC19.79■□□□□ 0.76
Nkx2-3P97334 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Nkx2-3P97334 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Nkx2-3P97334 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Nkx2-3P97334 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Nkx2-3P97334 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Nkx2-3P97334 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Nkx2-3P97334 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Nkx2-3P97334 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Nkx2-3P97334 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Nkx2-3P97334 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC19.78■□□□□ 0.76
Nkx2-3P97334 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC19.78■□□□□ 0.76
Nkx2-3P97334 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Nkx2-3P97334 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC19.78■□□□□ 0.76
Nkx2-3P97334 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Nkx2-3P97334 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Nkx2-3P97334 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Nkx2-3P97334 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Nkx2-3P97334 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Nkx2-3P97334 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Nkx2-3P97334 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Nkx2-3P97334 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Nkx2-3P97334 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Nkx2-3P97334 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Nkx2-3P97334 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC19.77■□□□□ 0.76
Nkx2-3P97334 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Nkx2-3P97334 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Nkx2-3P97334 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
Nkx2-3P97334 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Nkx2-3P97334 Gm27301-201ENSMUST00000184012 127 ntBASIC19.77■□□□□ 0.76
Nkx2-3P97334 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Nkx2-3P97334 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC19.77■□□□□ 0.76
Nkx2-3P97334 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC19.77■□□□□ 0.76
Nkx2-3P97334 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Nkx2-3P97334 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Nkx2-3P97334 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Nkx2-3P97334 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
Nkx2-3P97334 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
Nkx2-3P97334 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms