Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Six5P70178 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Six5P70178 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Six5P70178 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Six5P70178 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Six5P70178 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Six5P70178 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Six5P70178 Gm38327-201ENSMUST00000195852 1755 ntBASIC14.81□□□□□ -0.04
Six5P70178 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Six5P70178 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Six5P70178 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Six5P70178 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Six5P70178 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Six5P70178 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Six5P70178 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Six5P70178 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Six5P70178 Gm12895-201ENSMUST00000122214 226 ntBASIC14.81□□□□□ -0.04
Six5P70178 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
Six5P70178 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC14.81□□□□□ -0.04
Six5P70178 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Six5P70178 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Six5P70178 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Six5P70178 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Six5P70178 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Six5P70178 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Six5P70178 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Six5P70178 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC14.81□□□□□ -0.04
Six5P70178 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Six5P70178 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Six5P70178 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Six5P70178 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Six5P70178 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Six5P70178 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Six5P70178 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Six5P70178 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Six5P70178 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Six5P70178 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC14.8□□□□□ -0.04
Six5P70178 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Six5P70178 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Six5P70178 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Six5P70178 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Six5P70178 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Six5P70178 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Six5P70178 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Six5P70178 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Six5P70178 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC14.8□□□□□ -0.04
Six5P70178 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Six5P70178 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Six5P70178 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Six5P70178 Gm19430-201ENSMUST00000193847 2137 ntBASIC14.8□□□□□ -0.04
Six5P70178 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC14.8□□□□□ -0.04
Six5P70178 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Six5P70178 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC14.8□□□□□ -0.04
Six5P70178 Gm45412-201ENSMUST00000210217 2275 ntBASIC14.8□□□□□ -0.04
Six5P70178 Ntrk2-205ENSMUST00000224402 2284 ntBASIC14.8□□□□□ -0.04
Six5P70178 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Six5P70178 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Six5P70178 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Six5P70178 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Six5P70178 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Six5P70178 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Six5P70178 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC14.79□□□□□ -0.04
Six5P70178 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Six5P70178 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Six5P70178 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC14.79□□□□□ -0.04
Six5P70178 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Six5P70178 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Six5P70178 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Six5P70178 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Six5P70178 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Six5P70178 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Six5P70178 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
Six5P70178 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Six5P70178 AC069562.2-201ENSMUST00000224644 2146 ntBASIC14.79□□□□□ -0.04
Six5P70178 AC130671.1-201ENSMUST00000227384 1237 ntBASIC14.79□□□□□ -0.04
Six5P70178 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Six5P70178 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Six5P70178 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Six5P70178 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Six5P70178 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Six5P70178 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Six5P70178 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Six5P70178 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Six5P70178 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Six5P70178 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC14.78□□□□□ -0.04
Six5P70178 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Six5P70178 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Six5P70178 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Six5P70178 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Six5P70178 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
Six5P70178 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Six5P70178 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
Six5P70178 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Six5P70178 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Six5P70178 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Six5P70178 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC14.78□□□□□ -0.04
Six5P70178 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Six5P70178 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
Six5P70178 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Six5P70178 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms