Protein–RNA interactions for Protein: P56371

Rab4a, Ras-related protein Rab-4A, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab4aP56371 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rab4aP56371 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Rab4aP56371 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Rab4aP56371 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC12.52□□□□□ -0.4
Rab4aP56371 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Rab4aP56371 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Rab4aP56371 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Rab4aP56371 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.4
Rab4aP56371 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Rab4aP56371 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Rab4aP56371 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Rab4aP56371 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Rab4aP56371 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Rab4aP56371 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rab4aP56371 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rab4aP56371 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC12.52□□□□□ -0.41
Rab4aP56371 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rab4aP56371 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Rab4aP56371 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC12.52□□□□□ -0.41
Rab4aP56371 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rab4aP56371 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
Rab4aP56371 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rab4aP56371 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rab4aP56371 Gm9768-201ENSMUST00000206007 2861 ntBASIC12.52□□□□□ -0.41
Rab4aP56371 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Rab4aP56371 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rab4aP56371 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Rab4aP56371 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rab4aP56371 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rab4aP56371 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rab4aP56371 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rab4aP56371 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Rab4aP56371 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Rab4aP56371 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rab4aP56371 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rab4aP56371 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Rab4aP56371 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rab4aP56371 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC12.51□□□□□ -0.41
Rab4aP56371 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Rab4aP56371 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rab4aP56371 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Rab4aP56371 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Rab4aP56371 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rab4aP56371 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rab4aP56371 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rab4aP56371 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC12.51□□□□□ -0.41
Rab4aP56371 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rab4aP56371 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Rab4aP56371 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Rab4aP56371 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rab4aP56371 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rab4aP56371 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Rab4aP56371 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rab4aP56371 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rab4aP56371 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rab4aP56371 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Rab4aP56371 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rab4aP56371 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Rab4aP56371 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rab4aP56371 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
Rab4aP56371 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rab4aP56371 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rab4aP56371 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rab4aP56371 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Rab4aP56371 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rab4aP56371 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Rab4aP56371 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rab4aP56371 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rab4aP56371 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rab4aP56371 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rab4aP56371 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Rab4aP56371 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rab4aP56371 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rab4aP56371 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC12.5□□□□□ -0.41
Rab4aP56371 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rab4aP56371 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Rab4aP56371 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rab4aP56371 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Rab4aP56371 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rab4aP56371 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rab4aP56371 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rab4aP56371 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rab4aP56371 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Rab4aP56371 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rab4aP56371 Gm12134-201ENSMUST00000122109 520 ntBASIC12.5□□□□□ -0.41
Rab4aP56371 AC140264.2-202ENSMUST00000218746 817 ntBASIC12.5□□□□□ -0.41
Rab4aP56371 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC12.5□□□□□ -0.41
Rab4aP56371 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC12.5□□□□□ -0.41
Rab4aP56371 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Rab4aP56371 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Rab4aP56371 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rab4aP56371 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rab4aP56371 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Rab4aP56371 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rab4aP56371 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC12.5□□□□□ -0.41
Rab4aP56371 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rab4aP56371 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rab4aP56371 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
Rab4aP56371 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rab4aP56371 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms