Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rfx3P48381 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rfx3P48381 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Rfx3P48381 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rfx3P48381 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rfx3P48381 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Rfx3P48381 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Rfx3P48381 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rfx3P48381 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rfx3P48381 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rfx3P48381 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC14.32□□□□□ -0.12
Rfx3P48381 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rfx3P48381 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rfx3P48381 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rfx3P48381 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rfx3P48381 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rfx3P48381 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Rfx3P48381 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rfx3P48381 Gm10013-201ENSMUST00000106074 672 ntBASIC14.32□□□□□ -0.12
Rfx3P48381 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC14.32□□□□□ -0.12
Rfx3P48381 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC14.32□□□□□ -0.12
Rfx3P48381 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC14.32□□□□□ -0.12
Rfx3P48381 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC14.32□□□□□ -0.12
Rfx3P48381 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rfx3P48381 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rfx3P48381 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rfx3P48381 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Rfx3P48381 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rfx3P48381 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Rfx3P48381 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rfx3P48381 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Rfx3P48381 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rfx3P48381 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rfx3P48381 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rfx3P48381 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rfx3P48381 Gm15442-201ENSMUST00000117905 1527 ntBASIC14.31□□□□□ -0.12
Rfx3P48381 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Rfx3P48381 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rfx3P48381 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rfx3P48381 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
Rfx3P48381 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rfx3P48381 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rfx3P48381 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC14.31□□□□□ -0.12
Rfx3P48381 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rfx3P48381 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Rfx3P48381 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Rfx3P48381 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rfx3P48381 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rfx3P48381 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Rfx3P48381 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC14.31□□□□□ -0.12
Rfx3P48381 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rfx3P48381 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Rfx3P48381 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC14.31□□□□□ -0.12
Rfx3P48381 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC14.31□□□□□ -0.12
Rfx3P48381 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC14.31□□□□□ -0.12
Rfx3P48381 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rfx3P48381 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Rfx3P48381 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rfx3P48381 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Rfx3P48381 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rfx3P48381 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rfx3P48381 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rfx3P48381 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rfx3P48381 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rfx3P48381 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rfx3P48381 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
Rfx3P48381 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rfx3P48381 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rfx3P48381 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rfx3P48381 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rfx3P48381 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rfx3P48381 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rfx3P48381 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rfx3P48381 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rfx3P48381 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rfx3P48381 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Rfx3P48381 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Rfx3P48381 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rfx3P48381 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rfx3P48381 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rfx3P48381 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Rfx3P48381 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rfx3P48381 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rfx3P48381 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Rfx3P48381 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rfx3P48381 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rfx3P48381 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rfx3P48381 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Rfx3P48381 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rfx3P48381 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rfx3P48381 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC14.3□□□□□ -0.12
Rfx3P48381 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rfx3P48381 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rfx3P48381 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rfx3P48381 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rfx3P48381 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rfx3P48381 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rfx3P48381 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Rfx3P48381 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rfx3P48381 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms