Protein–RNA interactions for Protein: P08572

COL4A2, Collagen alpha-2(IV) chain, humanhuman

Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2P08572 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC18.81■□□□□ 0.6
COL4A2P08572 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
COL4A2P08572 AC009065.1-201ENST00000564055 1225 ntBASIC18.81■□□□□ 0.6
COL4A2P08572 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC18.81■□□□□ 0.6
COL4A2P08572 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
COL4A2P08572 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
COL4A2P08572 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
COL4A2P08572 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC18.81■□□□□ 0.6
COL4A2P08572 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
COL4A2P08572 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC18.81■□□□□ 0.6
COL4A2P08572 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
COL4A2P08572 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
COL4A2P08572 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
COL4A2P08572 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC18.81■□□□□ 0.6
COL4A2P08572 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
COL4A2P08572 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
COL4A2P08572 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
COL4A2P08572 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
COL4A2P08572 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
COL4A2P08572 AP000593.1-201ENST00000393668 712 ntBASIC18.8■□□□□ 0.6
COL4A2P08572 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
COL4A2P08572 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC18.8■□□□□ 0.6
COL4A2P08572 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
COL4A2P08572 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC18.8■□□□□ 0.6
COL4A2P08572 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
COL4A2P08572 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC18.8■□□□□ 0.6
COL4A2P08572 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
COL4A2P08572 AC096582.2-201ENST00000510860 516 ntBASIC18.8■□□□□ 0.6
COL4A2P08572 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC18.8■□□□□ 0.6
COL4A2P08572 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC18.8■□□□□ 0.6
COL4A2P08572 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC18.8■□□□□ 0.6
COL4A2P08572 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC18.8■□□□□ 0.6
COL4A2P08572 AF228730.7-201ENST00000641842 219 ntBASIC18.8■□□□□ 0.6
COL4A2P08572 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
COL4A2P08572 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
COL4A2P08572 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
COL4A2P08572 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
COL4A2P08572 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
COL4A2P08572 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
COL4A2P08572 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
COL4A2P08572 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
COL4A2P08572 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
COL4A2P08572 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
COL4A2P08572 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
COL4A2P08572 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
COL4A2P08572 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
COL4A2P08572 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
COL4A2P08572 AL590627.1-203ENST00000421194 1026 ntBASIC18.8■□□□□ 0.6
COL4A2P08572 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC18.8■□□□□ 0.6
COL4A2P08572 IGHV3-41-201ENST00000613121 348 ntBASIC18.8■□□□□ 0.6
COL4A2P08572 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC18.8■□□□□ 0.6
COL4A2P08572 ABBA01031661.1-201ENST00000634362 1253 ntBASIC18.8■□□□□ 0.6
COL4A2P08572 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
COL4A2P08572 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
COL4A2P08572 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
COL4A2P08572 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
COL4A2P08572 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC18.79■□□□□ 0.6
COL4A2P08572 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC18.79■□□□□ 0.6
COL4A2P08572 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
COL4A2P08572 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
COL4A2P08572 LINC01711-201ENST00000598340 967 ntBASIC18.79■□□□□ 0.6
COL4A2P08572 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC18.79■□□□□ 0.6
COL4A2P08572 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC18.79■□□□□ 0.6
COL4A2P08572 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC18.79■□□□□ 0.6
COL4A2P08572 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC18.79■□□□□ 0.6
COL4A2P08572 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
COL4A2P08572 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
COL4A2P08572 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
COL4A2P08572 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
COL4A2P08572 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC18.78■□□□□ 0.6
COL4A2P08572 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC18.78■□□□□ 0.6
COL4A2P08572 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
COL4A2P08572 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
COL4A2P08572 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC18.78■□□□□ 0.6
COL4A2P08572 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
COL4A2P08572 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
COL4A2P08572 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC18.78■□□□□ 0.6
COL4A2P08572 TLE1-202ENST00000376484 666 ntTSL 3 BASIC18.78■□□□□ 0.6
COL4A2P08572 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
COL4A2P08572 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC18.78■□□□□ 0.6
COL4A2P08572 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC18.78■□□□□ 0.6
COL4A2P08572 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC18.78■□□□□ 0.6
COL4A2P08572 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
COL4A2P08572 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
COL4A2P08572 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
COL4A2P08572 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
COL4A2P08572 NFYC-AS1-201ENST00000606277 1687 ntBASIC18.78■□□□□ 0.6
COL4A2P08572 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
COL4A2P08572 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
COL4A2P08572 MED22-202ENST00000371999 987 ntTSL 3 BASIC18.77■□□□□ 0.6
COL4A2P08572 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC18.77■□□□□ 0.6
COL4A2P08572 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
COL4A2P08572 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
COL4A2P08572 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC18.77■□□□□ 0.6
COL4A2P08572 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
COL4A2P08572 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC18.77■□□□□ 0.6
COL4A2P08572 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
COL4A2P08572 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
COL4A2P08572 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
COL4A2P08572 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms