Protein–RNA interactions for Protein: O55038

Cxcl13, C-X-C motif chemokine 13, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl13O55038 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Cxcl13O55038 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Cxcl13O55038 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cxcl13O55038 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cxcl13O55038 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cxcl13O55038 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cxcl13O55038 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cxcl13O55038 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Cxcl13O55038 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Cxcl13O55038 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Cxcl13O55038 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Cxcl13O55038 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cxcl13O55038 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cxcl13O55038 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Cxcl13O55038 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cxcl13O55038 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cxcl13O55038 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cxcl13O55038 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cxcl13O55038 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Cxcl13O55038 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cxcl13O55038 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Cxcl13O55038 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Cxcl13O55038 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
Cxcl13O55038 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Cxcl13O55038 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC13.35□□□□□ -0.27
Cxcl13O55038 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Cxcl13O55038 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC13.35□□□□□ -0.27
Cxcl13O55038 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cxcl13O55038 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cxcl13O55038 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC13.35□□□□□ -0.27
Cxcl13O55038 Gm5867-201ENSMUST00000063197 592 ntBASIC13.35□□□□□ -0.27
Cxcl13O55038 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cxcl13O55038 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Cxcl13O55038 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cxcl13O55038 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cxcl13O55038 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cxcl13O55038 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Cxcl13O55038 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC13.35□□□□□ -0.27
Cxcl13O55038 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Cxcl13O55038 AC122901.1-201ENSMUST00000214203 1790 ntBASIC13.35□□□□□ -0.27
Cxcl13O55038 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Cxcl13O55038 Haglr-201ENSMUST00000100000 2085 ntBASIC13.35□□□□□ -0.27
Cxcl13O55038 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cxcl13O55038 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cxcl13O55038 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cxcl13O55038 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cxcl13O55038 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cxcl13O55038 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cxcl13O55038 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cxcl13O55038 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cxcl13O55038 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Cxcl13O55038 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cxcl13O55038 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC13.34□□□□□ -0.27
Cxcl13O55038 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cxcl13O55038 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cxcl13O55038 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cxcl13O55038 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cxcl13O55038 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cxcl13O55038 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cxcl13O55038 Gm11594-201ENSMUST00000122313 162 ntBASIC13.34□□□□□ -0.27
Cxcl13O55038 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC13.34□□□□□ -0.27
Cxcl13O55038 Gm9727-201ENSMUST00000161387 555 ntBASIC13.34□□□□□ -0.27
Cxcl13O55038 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cxcl13O55038 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC13.34□□□□□ -0.27
Cxcl13O55038 Gm43073-201ENSMUST00000198200 1189 ntBASIC13.34□□□□□ -0.27
Cxcl13O55038 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC13.34□□□□□ -0.27
Cxcl13O55038 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cxcl13O55038 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cxcl13O55038 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cxcl13O55038 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cxcl13O55038 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cxcl13O55038 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cxcl13O55038 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cxcl13O55038 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cxcl13O55038 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cxcl13O55038 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cxcl13O55038 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.27
Cxcl13O55038 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Cxcl13O55038 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Cxcl13O55038 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Cxcl13O55038 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cxcl13O55038 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cxcl13O55038 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cxcl13O55038 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Cxcl13O55038 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Cxcl13O55038 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cxcl13O55038 Gm2213-201ENSMUST00000197485 688 ntBASIC13.33□□□□□ -0.28
Cxcl13O55038 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC13.33□□□□□ -0.28
Cxcl13O55038 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Cxcl13O55038 AC127302.2-201ENSMUST00000215212 268 ntBASIC13.33□□□□□ -0.28
Cxcl13O55038 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Cxcl13O55038 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cxcl13O55038 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC13.33□□□□□ -0.28
Cxcl13O55038 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC13.33□□□□□ -0.28
Cxcl13O55038 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cxcl13O55038 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cxcl13O55038 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cxcl13O55038 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cxcl13O55038 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cxcl13O55038 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms