Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdh1F7BJK1 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdh1F7BJK1 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
Pcdh1F7BJK1 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdh1F7BJK1 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
Pcdh1F7BJK1 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdh1F7BJK1 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdh1F7BJK1 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC14.27□□□□□ -0.12
Pcdh1F7BJK1 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdh1F7BJK1 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdh1F7BJK1 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC14.27□□□□□ -0.12
Pcdh1F7BJK1 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC14.27□□□□□ -0.12
Pcdh1F7BJK1 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdh1F7BJK1 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdh1F7BJK1 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdh1F7BJK1 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Pcdh1F7BJK1 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Pcdh1F7BJK1 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC14.27□□□□□ -0.12
Pcdh1F7BJK1 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdh1F7BJK1 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Pcdh1F7BJK1 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdh1F7BJK1 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdh1F7BJK1 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdh1F7BJK1 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdh1F7BJK1 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdh1F7BJK1 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdh1F7BJK1 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdh1F7BJK1 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC14.27□□□□□ -0.13
Pcdh1F7BJK1 Gm2274-201ENSMUST00000184539 609 ntBASIC14.27□□□□□ -0.13
Pcdh1F7BJK1 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC14.27□□□□□ -0.13
Pcdh1F7BJK1 AL672049.1-201ENSMUST00000197943 91 ntBASIC14.27□□□□□ -0.13
Pcdh1F7BJK1 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC14.27□□□□□ -0.13
Pcdh1F7BJK1 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdh1F7BJK1 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdh1F7BJK1 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdh1F7BJK1 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdh1F7BJK1 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Pcdh1F7BJK1 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Pcdh1F7BJK1 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Pcdh1F7BJK1 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdh1F7BJK1 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdh1F7BJK1 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdh1F7BJK1 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdh1F7BJK1 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC14.26□□□□□ -0.13
Pcdh1F7BJK1 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdh1F7BJK1 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdh1F7BJK1 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdh1F7BJK1 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdh1F7BJK1 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdh1F7BJK1 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdh1F7BJK1 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdh1F7BJK1 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdh1F7BJK1 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdh1F7BJK1 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdh1F7BJK1 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC14.26□□□□□ -0.13
Pcdh1F7BJK1 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdh1F7BJK1 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Pcdh1F7BJK1 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdh1F7BJK1 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Pcdh1F7BJK1 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdh1F7BJK1 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC14.26□□□□□ -0.13
Pcdh1F7BJK1 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdh1F7BJK1 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC14.26□□□□□ -0.13
Pcdh1F7BJK1 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdh1F7BJK1 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdh1F7BJK1 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC14.26□□□□□ -0.13
Pcdh1F7BJK1 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC14.26□□□□□ -0.13
Pcdh1F7BJK1 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdh1F7BJK1 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdh1F7BJK1 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdh1F7BJK1 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdh1F7BJK1 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Pcdh1F7BJK1 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdh1F7BJK1 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdh1F7BJK1 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdh1F7BJK1 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdh1F7BJK1 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdh1F7BJK1 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdh1F7BJK1 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdh1F7BJK1 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Pcdh1F7BJK1 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdh1F7BJK1 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Pcdh1F7BJK1 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdh1F7BJK1 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC14.25□□□□□ -0.13
Pcdh1F7BJK1 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC14.25□□□□□ -0.13
Pcdh1F7BJK1 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC14.25□□□□□ -0.13
Pcdh1F7BJK1 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdh1F7BJK1 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdh1F7BJK1 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Pcdh1F7BJK1 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdh1F7BJK1 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdh1F7BJK1 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdh1F7BJK1 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdh1F7BJK1 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdh1F7BJK1 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdh1F7BJK1 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Pcdh1F7BJK1 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdh1F7BJK1 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdh1F7BJK1 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdh1F7BJK1 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms