Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ube4aE9Q735 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ube4aE9Q735 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ube4aE9Q735 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Ube4aE9Q735 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ube4aE9Q735 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Ube4aE9Q735 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC18.94■□□□□ 0.62
Ube4aE9Q735 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ube4aE9Q735 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ube4aE9Q735 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Ube4aE9Q735 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ube4aE9Q735 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Ube4aE9Q735 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ube4aE9Q735 AC119177.1-201ENSMUST00000227647 1332 ntBASIC18.94■□□□□ 0.62
Ube4aE9Q735 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ube4aE9Q735 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ube4aE9Q735 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC18.93■□□□□ 0.62
Ube4aE9Q735 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Ube4aE9Q735 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ube4aE9Q735 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ube4aE9Q735 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ube4aE9Q735 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ube4aE9Q735 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ube4aE9Q735 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ube4aE9Q735 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ube4aE9Q735 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ube4aE9Q735 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC18.93■□□□□ 0.62
Ube4aE9Q735 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC18.93■□□□□ 0.62
Ube4aE9Q735 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC18.93■□□□□ 0.62
Ube4aE9Q735 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ube4aE9Q735 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Ube4aE9Q735 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ube4aE9Q735 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ube4aE9Q735 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC18.93■□□□□ 0.62
Ube4aE9Q735 Gm44729-201ENSMUST00000206759 2052 ntBASIC18.93■□□□□ 0.62
Ube4aE9Q735 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ube4aE9Q735 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ube4aE9Q735 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Ube4aE9Q735 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ube4aE9Q735 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ube4aE9Q735 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ube4aE9Q735 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ube4aE9Q735 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ube4aE9Q735 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ube4aE9Q735 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ube4aE9Q735 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC18.92■□□□□ 0.62
Ube4aE9Q735 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC18.92■□□□□ 0.62
Ube4aE9Q735 Mir7036b-201ENSMUST00000184791 63 ntBASIC18.92■□□□□ 0.62
Ube4aE9Q735 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ube4aE9Q735 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
Ube4aE9Q735 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ube4aE9Q735 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ube4aE9Q735 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Ube4aE9Q735 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ube4aE9Q735 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ube4aE9Q735 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Ube4aE9Q735 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ube4aE9Q735 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ube4aE9Q735 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Ube4aE9Q735 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Ube4aE9Q735 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Ube4aE9Q735 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ube4aE9Q735 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC18.91■□□□□ 0.62
Ube4aE9Q735 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Ube4aE9Q735 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC18.91■□□□□ 0.62
Ube4aE9Q735 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ube4aE9Q735 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Ube4aE9Q735 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC18.91■□□□□ 0.62
Ube4aE9Q735 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ube4aE9Q735 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ube4aE9Q735 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Ube4aE9Q735 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ube4aE9Q735 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ube4aE9Q735 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Ube4aE9Q735 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ube4aE9Q735 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ube4aE9Q735 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ube4aE9Q735 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC18.91■□□□□ 0.62
Ube4aE9Q735 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Ube4aE9Q735 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Ube4aE9Q735 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ube4aE9Q735 Shroom3-211ENSMUST00000225438 5742 ntBASIC18.9■□□□□ 0.62
Ube4aE9Q735 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Ube4aE9Q735 Gm28265-201ENSMUST00000188201 2319 ntBASIC18.9■□□□□ 0.62
Ube4aE9Q735 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ube4aE9Q735 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ube4aE9Q735 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Ube4aE9Q735 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC18.9■□□□□ 0.62
Ube4aE9Q735 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
Ube4aE9Q735 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ube4aE9Q735 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ube4aE9Q735 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC18.9■□□□□ 0.62
Ube4aE9Q735 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ube4aE9Q735 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ube4aE9Q735 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC18.9■□□□□ 0.62
Ube4aE9Q735 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ube4aE9Q735 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ube4aE9Q735 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ube4aE9Q735 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ube4aE9Q735 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC18.9■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms