Protein–RNA interactions for Protein: A0N8R0

Trav12d-1, T cell receptor alpha variable 12D-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-1A0N8R0 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav12d-1A0N8R0 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav12d-1A0N8R0 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trav12d-1A0N8R0 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC12.75□□□□□ -0.37
Trav12d-1A0N8R0 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC12.75□□□□□ -0.37
Trav12d-1A0N8R0 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trav12d-1A0N8R0 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC12.75□□□□□ -0.37
Trav12d-1A0N8R0 BC037039-201ENSMUST00000192003 2205 ntBASIC12.75□□□□□ -0.37
Trav12d-1A0N8R0 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Trav12d-1A0N8R0 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav12d-1A0N8R0 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav12d-1A0N8R0 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav12d-1A0N8R0 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC12.75□□□□□ -0.37
Trav12d-1A0N8R0 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav12d-1A0N8R0 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav12d-1A0N8R0 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Trav12d-1A0N8R0 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Trav12d-1A0N8R0 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav12d-1A0N8R0 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Trav12d-1A0N8R0 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav12d-1A0N8R0 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav12d-1A0N8R0 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Trav12d-1A0N8R0 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav12d-1A0N8R0 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav12d-1A0N8R0 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav12d-1A0N8R0 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Trav12d-1A0N8R0 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav12d-1A0N8R0 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Trav12d-1A0N8R0 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav12d-1A0N8R0 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav12d-1A0N8R0 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Trav12d-1A0N8R0 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav12d-1A0N8R0 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav12d-1A0N8R0 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav12d-1A0N8R0 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Trav12d-1A0N8R0 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav12d-1A0N8R0 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Trav12d-1A0N8R0 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
Trav12d-1A0N8R0 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
Trav12d-1A0N8R0 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav12d-1A0N8R0 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC12.74□□□□□ -0.37
Trav12d-1A0N8R0 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav12d-1A0N8R0 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Trav12d-1A0N8R0 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav12d-1A0N8R0 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav12d-1A0N8R0 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav12d-1A0N8R0 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav12d-1A0N8R0 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav12d-1A0N8R0 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav12d-1A0N8R0 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav12d-1A0N8R0 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Trav12d-1A0N8R0 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav12d-1A0N8R0 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav12d-1A0N8R0 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav12d-1A0N8R0 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Trav12d-1A0N8R0 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav12d-1A0N8R0 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav12d-1A0N8R0 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav12d-1A0N8R0 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Trav12d-1A0N8R0 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
Trav12d-1A0N8R0 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC12.73□□□□□ -0.37
Trav12d-1A0N8R0 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav12d-1A0N8R0 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav12d-1A0N8R0 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav12d-1A0N8R0 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC12.73□□□□□ -0.37
Trav12d-1A0N8R0 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav12d-1A0N8R0 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Trav12d-1A0N8R0 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav12d-1A0N8R0 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC12.73□□□□□ -0.37
Trav12d-1A0N8R0 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav12d-1A0N8R0 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC12.73□□□□□ -0.37
Trav12d-1A0N8R0 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav12d-1A0N8R0 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav12d-1A0N8R0 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav12d-1A0N8R0 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav12d-1A0N8R0 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav12d-1A0N8R0 Gm30025-201ENSMUST00000218555 728 ntBASIC12.73□□□□□ -0.37
Trav12d-1A0N8R0 Gm5417-201ENSMUST00000079706 384 ntBASIC12.73□□□□□ -0.37
Trav12d-1A0N8R0 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav12d-1A0N8R0 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Trav12d-1A0N8R0 Sybu-209ENSMUST00000228639 4113 ntBASIC12.73□□□□□ -0.37
Trav12d-1A0N8R0 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC12.73□□□□□ -0.37
Trav12d-1A0N8R0 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav12d-1A0N8R0 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav12d-1A0N8R0 Gm9889-202ENSMUST00000206983 1577 ntBASIC12.73□□□□□ -0.37
Trav12d-1A0N8R0 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav12d-1A0N8R0 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC12.72□□□□□ -0.37
Trav12d-1A0N8R0 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav12d-1A0N8R0 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav12d-1A0N8R0 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav12d-1A0N8R0 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav12d-1A0N8R0 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Trav12d-1A0N8R0 Gm44443-201ENSMUST00000204396 5633 ntBASIC12.72□□□□□ -0.37
Trav12d-1A0N8R0 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav12d-1A0N8R0 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC12.72□□□□□ -0.37
Trav12d-1A0N8R0 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC12.72□□□□□ -0.37
Trav12d-1A0N8R0 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav12d-1A0N8R0 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav12d-1A0N8R0 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC12.72□□□□□ -0.37
Trav12d-1A0N8R0 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms