Protein–RNA interactions for Protein: A0A0G2JF28

Igkv8-27, Immunoglobulin kappa chain variable 8-27 (Fragment), mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv8-27A0A0G2JF28 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.82
Igkv8-27A0A0G2JF28 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC9.96□□□□□ -0.82
Igkv8-27A0A0G2JF28 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC9.96□□□□□ -0.82
Igkv8-27A0A0G2JF28 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC9.96□□□□□ -0.82
Igkv8-27A0A0G2JF28 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Igkv8-27A0A0G2JF28 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC9.96□□□□□ -0.82
Igkv8-27A0A0G2JF28 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Igkv8-27A0A0G2JF28 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
Igkv8-27A0A0G2JF28 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Igkv8-27A0A0G2JF28 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Igkv8-27A0A0G2JF28 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Igkv8-27A0A0G2JF28 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Igkv8-27A0A0G2JF28 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Igkv8-27A0A0G2JF28 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Igkv8-27A0A0G2JF28 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Igkv8-27A0A0G2JF28 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
Igkv8-27A0A0G2JF28 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Igkv8-27A0A0G2JF28 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC9.95□□□□□ -0.82
Igkv8-27A0A0G2JF28 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
Igkv8-27A0A0G2JF28 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
Igkv8-27A0A0G2JF28 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC9.95□□□□□ -0.82
Igkv8-27A0A0G2JF28 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Igkv8-27A0A0G2JF28 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Igkv8-27A0A0G2JF28 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Igkv8-27A0A0G2JF28 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Igkv8-27A0A0G2JF28 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Igkv8-27A0A0G2JF28 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC9.95□□□□□ -0.82
Igkv8-27A0A0G2JF28 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC9.95□□□□□ -0.82
Igkv8-27A0A0G2JF28 Gm15375-201ENSMUST00000119510 849 ntBASIC9.95□□□□□ -0.82
Igkv8-27A0A0G2JF28 Gm12821-201ENSMUST00000120022 600 ntBASIC9.95□□□□□ -0.82
Igkv8-27A0A0G2JF28 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC9.95□□□□□ -0.82
Igkv8-27A0A0G2JF28 Gm27454-201ENSMUST00000185090 204 ntBASIC9.95□□□□□ -0.82
Igkv8-27A0A0G2JF28 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC9.95□□□□□ -0.82
Igkv8-27A0A0G2JF28 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Igkv8-27A0A0G2JF28 AC159205.3-201ENSMUST00000224614 874 ntBASIC9.95□□□□□ -0.82
Igkv8-27A0A0G2JF28 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Igkv8-27A0A0G2JF28 Gm13241-201ENSMUST00000094493 780 ntBASIC9.95□□□□□ -0.82
Igkv8-27A0A0G2JF28 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Igkv8-27A0A0G2JF28 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Igkv8-27A0A0G2JF28 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
Igkv8-27A0A0G2JF28 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Igkv8-27A0A0G2JF28 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
Igkv8-27A0A0G2JF28 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Igkv8-27A0A0G2JF28 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Igkv8-27A0A0G2JF28 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Igkv8-27A0A0G2JF28 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Igkv8-27A0A0G2JF28 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Igkv8-27A0A0G2JF28 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Igkv8-27A0A0G2JF28 Gm45504-201ENSMUST00000211407 2107 ntBASIC9.95□□□□□ -0.82
Igkv8-27A0A0G2JF28 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC9.95□□□□□ -0.82
Igkv8-27A0A0G2JF28 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Igkv8-27A0A0G2JF28 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Igkv8-27A0A0G2JF28 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Igkv8-27A0A0G2JF28 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Igkv8-27A0A0G2JF28 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
Igkv8-27A0A0G2JF28 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Igkv8-27A0A0G2JF28 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Igkv8-27A0A0G2JF28 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Igkv8-27A0A0G2JF28 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
Igkv8-27A0A0G2JF28 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Igkv8-27A0A0G2JF28 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Igkv8-27A0A0G2JF28 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Igkv8-27A0A0G2JF28 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Igkv8-27A0A0G2JF28 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC9.94□□□□□ -0.82
Igkv8-27A0A0G2JF28 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
Igkv8-27A0A0G2JF28 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Igkv8-27A0A0G2JF28 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Igkv8-27A0A0G2JF28 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Igkv8-27A0A0G2JF28 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Igkv8-27A0A0G2JF28 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC9.94□□□□□ -0.82
Igkv8-27A0A0G2JF28 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Igkv8-27A0A0G2JF28 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
Igkv8-27A0A0G2JF28 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Igkv8-27A0A0G2JF28 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Igkv8-27A0A0G2JF28 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Igkv8-27A0A0G2JF28 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Igkv8-27A0A0G2JF28 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Igkv8-27A0A0G2JF28 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
Igkv8-27A0A0G2JF28 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Igkv8-27A0A0G2JF28 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Igkv8-27A0A0G2JF28 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Igkv8-27A0A0G2JF28 Gm12134-201ENSMUST00000122109 520 ntBASIC9.94□□□□□ -0.82
Igkv8-27A0A0G2JF28 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC9.94□□□□□ -0.82
Igkv8-27A0A0G2JF28 Gm24841-201ENSMUST00000158676 357 ntBASIC9.94□□□□□ -0.82
Igkv8-27A0A0G2JF28 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC9.94□□□□□ -0.82
Igkv8-27A0A0G2JF28 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
Igkv8-27A0A0G2JF28 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
Igkv8-27A0A0G2JF28 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
Igkv8-27A0A0G2JF28 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Igkv8-27A0A0G2JF28 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
Igkv8-27A0A0G2JF28 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC9.94□□□□□ -0.82
Igkv8-27A0A0G2JF28 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Igkv8-27A0A0G2JF28 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Igkv8-27A0A0G2JF28 Gm43399-201ENSMUST00000202546 2374 ntBASIC9.94□□□□□ -0.82
Igkv8-27A0A0G2JF28 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Igkv8-27A0A0G2JF28 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Igkv8-27A0A0G2JF28 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Igkv8-27A0A0G2JF28 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Igkv8-27A0A0G2JF28 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Igkv8-27A0A0G2JF28 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC9.93□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms