Protein–RNA interactions for Protein: A0A075B6A4

Trav12d-3, T cell receptor alpha variable 12D-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-3A0A075B6A4 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trav12d-3A0A075B6A4 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav12d-3A0A075B6A4 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav12d-3A0A075B6A4 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Trav12d-3A0A075B6A4 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trav12d-3A0A075B6A4 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Trav12d-3A0A075B6A4 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Trav12d-3A0A075B6A4 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trav12d-3A0A075B6A4 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav12d-3A0A075B6A4 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav12d-3A0A075B6A4 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav12d-3A0A075B6A4 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC11.85□□□□□ -0.51
Trav12d-3A0A075B6A4 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC11.85□□□□□ -0.51
Trav12d-3A0A075B6A4 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Trav12d-3A0A075B6A4 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Trav12d-3A0A075B6A4 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav12d-3A0A075B6A4 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Trav12d-3A0A075B6A4 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav12d-3A0A075B6A4 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trav12d-3A0A075B6A4 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav12d-3A0A075B6A4 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav12d-3A0A075B6A4 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav12d-3A0A075B6A4 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav12d-3A0A075B6A4 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav12d-3A0A075B6A4 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav12d-3A0A075B6A4 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trav12d-3A0A075B6A4 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav12d-3A0A075B6A4 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav12d-3A0A075B6A4 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Trav12d-3A0A075B6A4 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trav12d-3A0A075B6A4 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav12d-3A0A075B6A4 Fbxl12-205ENSMUST00000140702 1555 ntBASIC11.84□□□□□ -0.51
Trav12d-3A0A075B6A4 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav12d-3A0A075B6A4 Camk2g-217ENSMUST00000226630 1937 ntBASIC11.84□□□□□ -0.51
Trav12d-3A0A075B6A4 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC11.84□□□□□ -0.51
Trav12d-3A0A075B6A4 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav12d-3A0A075B6A4 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav12d-3A0A075B6A4 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav12d-3A0A075B6A4 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav12d-3A0A075B6A4 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav12d-3A0A075B6A4 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav12d-3A0A075B6A4 Gm15847-201ENSMUST00000121417 1065 ntBASIC11.84□□□□□ -0.51
Trav12d-3A0A075B6A4 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC11.84□□□□□ -0.51
Trav12d-3A0A075B6A4 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC11.84□□□□□ -0.51
Trav12d-3A0A075B6A4 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC11.84□□□□□ -0.51
Trav12d-3A0A075B6A4 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav12d-3A0A075B6A4 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Trav12d-3A0A075B6A4 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav12d-3A0A075B6A4 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav12d-3A0A075B6A4 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Trav12d-3A0A075B6A4 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav12d-3A0A075B6A4 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav12d-3A0A075B6A4 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC11.84□□□□□ -0.51
Trav12d-3A0A075B6A4 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Trav12d-3A0A075B6A4 Actl10-202ENSMUST00000226583 1501 ntBASIC11.84□□□□□ -0.51
Trav12d-3A0A075B6A4 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav12d-3A0A075B6A4 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Trav12d-3A0A075B6A4 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav12d-3A0A075B6A4 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav12d-3A0A075B6A4 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav12d-3A0A075B6A4 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav12d-3A0A075B6A4 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Trav12d-3A0A075B6A4 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC11.84□□□□□ -0.51
Trav12d-3A0A075B6A4 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trav12d-3A0A075B6A4 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav12d-3A0A075B6A4 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav12d-3A0A075B6A4 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav12d-3A0A075B6A4 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC11.84□□□□□ -0.51
Trav12d-3A0A075B6A4 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.51
Trav12d-3A0A075B6A4 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Trav12d-3A0A075B6A4 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Trav12d-3A0A075B6A4 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav12d-3A0A075B6A4 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav12d-3A0A075B6A4 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav12d-3A0A075B6A4 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav12d-3A0A075B6A4 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav12d-3A0A075B6A4 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav12d-3A0A075B6A4 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC11.83□□□□□ -0.52
Trav12d-3A0A075B6A4 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav12d-3A0A075B6A4 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav12d-3A0A075B6A4 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav12d-3A0A075B6A4 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav12d-3A0A075B6A4 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav12d-3A0A075B6A4 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav12d-3A0A075B6A4 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav12d-3A0A075B6A4 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Trav12d-3A0A075B6A4 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC11.83□□□□□ -0.52
Trav12d-3A0A075B6A4 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC11.83□□□□□ -0.52
Trav12d-3A0A075B6A4 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC11.83□□□□□ -0.52
Trav12d-3A0A075B6A4 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav12d-3A0A075B6A4 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav12d-3A0A075B6A4 Gm13241-201ENSMUST00000094493 780 ntBASIC11.83□□□□□ -0.52
Trav12d-3A0A075B6A4 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav12d-3A0A075B6A4 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Trav12d-3A0A075B6A4 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav12d-3A0A075B6A4 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav12d-3A0A075B6A4 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav12d-3A0A075B6A4 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav12d-3A0A075B6A4 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav12d-3A0A075B6A4 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC11.83□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms