Protein–RNA interactions for Protein: A0A075B649

Trav13-2, T cell receptor alpha variable 13-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-2A0A075B649 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Trav13-2A0A075B649 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav13-2A0A075B649 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav13-2A0A075B649 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC10.66□□□□□ -0.7
Trav13-2A0A075B649 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav13-2A0A075B649 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC10.66□□□□□ -0.7
Trav13-2A0A075B649 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Trav13-2A0A075B649 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Trav13-2A0A075B649 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC10.66□□□□□ -0.7
Trav13-2A0A075B649 Gm29257-201ENSMUST00000186115 639 ntBASIC10.66□□□□□ -0.7
Trav13-2A0A075B649 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Trav13-2A0A075B649 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC10.66□□□□□ -0.7
Trav13-2A0A075B649 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav13-2A0A075B649 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Trav13-2A0A075B649 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav13-2A0A075B649 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC10.66□□□□□ -0.7
Trav13-2A0A075B649 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav13-2A0A075B649 Gm44616-201ENSMUST00000206417 1732 ntBASIC10.66□□□□□ -0.7
Trav13-2A0A075B649 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Trav13-2A0A075B649 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Trav13-2A0A075B649 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav13-2A0A075B649 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav13-2A0A075B649 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Trav13-2A0A075B649 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Trav13-2A0A075B649 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav13-2A0A075B649 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav13-2A0A075B649 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav13-2A0A075B649 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Trav13-2A0A075B649 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav13-2A0A075B649 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav13-2A0A075B649 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav13-2A0A075B649 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC10.66□□□□□ -0.7
Trav13-2A0A075B649 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Trav13-2A0A075B649 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Trav13-2A0A075B649 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav13-2A0A075B649 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC10.65□□□□□ -0.7
Trav13-2A0A075B649 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav13-2A0A075B649 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav13-2A0A075B649 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
Trav13-2A0A075B649 Phf7-203ENSMUST00000226565 1971 ntBASIC10.65□□□□□ -0.7
Trav13-2A0A075B649 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav13-2A0A075B649 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav13-2A0A075B649 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav13-2A0A075B649 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC10.65□□□□□ -0.7
Trav13-2A0A075B649 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC10.65□□□□□ -0.7
Trav13-2A0A075B649 Mir1199-201ENSMUST00000117015 119 ntBASIC10.65□□□□□ -0.7
Trav13-2A0A075B649 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC10.65□□□□□ -0.7
Trav13-2A0A075B649 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Trav13-2A0A075B649 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Trav13-2A0A075B649 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC10.65□□□□□ -0.7
Trav13-2A0A075B649 Gm16042-201ENSMUST00000204813 1247 ntBASIC10.65□□□□□ -0.7
Trav13-2A0A075B649 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
Trav13-2A0A075B649 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC10.65□□□□□ -0.7
Trav13-2A0A075B649 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC10.65□□□□□ -0.7
Trav13-2A0A075B649 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav13-2A0A075B649 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav13-2A0A075B649 AC154855.1-201ENSMUST00000227353 1458 ntBASIC10.65□□□□□ -0.7
Trav13-2A0A075B649 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav13-2A0A075B649 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav13-2A0A075B649 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Trav13-2A0A075B649 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav13-2A0A075B649 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
Trav13-2A0A075B649 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav13-2A0A075B649 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav13-2A0A075B649 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav13-2A0A075B649 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
Trav13-2A0A075B649 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Trav13-2A0A075B649 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.71
Trav13-2A0A075B649 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.71
Trav13-2A0A075B649 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
Trav13-2A0A075B649 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Trav13-2A0A075B649 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav13-2A0A075B649 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Trav13-2A0A075B649 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
Trav13-2A0A075B649 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav13-2A0A075B649 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Trav13-2A0A075B649 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav13-2A0A075B649 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav13-2A0A075B649 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav13-2A0A075B649 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav13-2A0A075B649 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav13-2A0A075B649 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav13-2A0A075B649 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav13-2A0A075B649 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav13-2A0A075B649 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav13-2A0A075B649 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav13-2A0A075B649 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC10.64□□□□□ -0.71
Trav13-2A0A075B649 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC10.64□□□□□ -0.71
Trav13-2A0A075B649 Otx2os1-204ENSMUST00000227221 751 ntBASIC10.64□□□□□ -0.71
Trav13-2A0A075B649 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav13-2A0A075B649 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav13-2A0A075B649 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav13-2A0A075B649 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav13-2A0A075B649 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav13-2A0A075B649 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Trav13-2A0A075B649 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav13-2A0A075B649 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Trav13-2A0A075B649 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav13-2A0A075B649 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav13-2A0A075B649 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms