Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CHD7Q9P2D1 GPX1P2-201ENST00000429271 606 ntBASIC19.83■□□□□ 0.77
CHD7Q9P2D1 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC19.83■□□□□ 0.76
CHD7Q9P2D1 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CHD7Q9P2D1 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CHD7Q9P2D1 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC19.83■□□□□ 0.76
CHD7Q9P2D1 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CHD7Q9P2D1 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC19.83■□□□□ 0.76
CHD7Q9P2D1 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CHD7Q9P2D1 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CHD7Q9P2D1 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CHD7Q9P2D1 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC19.83■□□□□ 0.76
CHD7Q9P2D1 AL035633.1-201ENST00000406139 838 ntBASIC19.83■□□□□ 0.76
CHD7Q9P2D1 HNRNPA1P28-201ENST00000424481 961 ntBASIC19.83■□□□□ 0.76
CHD7Q9P2D1 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC19.83■□□□□ 0.76
CHD7Q9P2D1 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC19.83■□□□□ 0.76
CHD7Q9P2D1 AC116407.3-201ENST00000623905 1129 ntBASIC19.83■□□□□ 0.76
CHD7Q9P2D1 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CHD7Q9P2D1 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC19.82■□□□□ 0.76
CHD7Q9P2D1 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CHD7Q9P2D1 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
CHD7Q9P2D1 AC079834.2-201ENST00000609776 1949 ntBASIC19.82■□□□□ 0.76
CHD7Q9P2D1 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC19.82■□□□□ 0.76
CHD7Q9P2D1 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC19.82■□□□□ 0.76
CHD7Q9P2D1 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC19.82■□□□□ 0.76
CHD7Q9P2D1 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
CHD7Q9P2D1 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
CHD7Q9P2D1 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC19.82■□□□□ 0.76
CHD7Q9P2D1 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CHD7Q9P2D1 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CHD7Q9P2D1 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CHD7Q9P2D1 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC19.82■□□□□ 0.76
CHD7Q9P2D1 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC19.82■□□□□ 0.76
CHD7Q9P2D1 AC008608.2-201ENST00000606089 416 ntBASIC19.82■□□□□ 0.76
CHD7Q9P2D1 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CHD7Q9P2D1 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC19.81■□□□□ 0.76
CHD7Q9P2D1 AC012640.2-201ENST00000561606 901 ntBASIC19.81■□□□□ 0.76
CHD7Q9P2D1 AC034105.1-201ENST00000563488 319 ntBASIC19.81■□□□□ 0.76
CHD7Q9P2D1 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CHD7Q9P2D1 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CHD7Q9P2D1 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC19.81■□□□□ 0.76
CHD7Q9P2D1 NUS1P2-201ENST00000417358 873 ntBASIC19.81■□□□□ 0.76
CHD7Q9P2D1 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC19.81■□□□□ 0.76
CHD7Q9P2D1 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC19.81■□□□□ 0.76
CHD7Q9P2D1 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CHD7Q9P2D1 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC19.81■□□□□ 0.76
CHD7Q9P2D1 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CHD7Q9P2D1 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CHD7Q9P2D1 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CHD7Q9P2D1 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CHD7Q9P2D1 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
CHD7Q9P2D1 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CHD7Q9P2D1 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
CHD7Q9P2D1 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC19.8■□□□□ 0.76
CHD7Q9P2D1 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CHD7Q9P2D1 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CHD7Q9P2D1 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC19.8■□□□□ 0.76
CHD7Q9P2D1 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC19.8■□□□□ 0.76
CHD7Q9P2D1 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
CHD7Q9P2D1 FAM197Y3-203ENST00000618346 717 ntBASIC19.8■□□□□ 0.76
CHD7Q9P2D1 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CHD7Q9P2D1 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CHD7Q9P2D1 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC19.8■□□□□ 0.76
CHD7Q9P2D1 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CHD7Q9P2D1 SCARNA2-201ENST00000458748 420 ntBASIC19.8■□□□□ 0.76
CHD7Q9P2D1 AC134684.3-201ENST00000641758 218 ntBASIC19.8■□□□□ 0.76
CHD7Q9P2D1 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
CHD7Q9P2D1 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CHD7Q9P2D1 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CHD7Q9P2D1 UPF3AP3-201ENST00000420996 769 ntBASIC19.8■□□□□ 0.76
CHD7Q9P2D1 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC19.8■□□□□ 0.76
CHD7Q9P2D1 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC19.8■□□□□ 0.76
CHD7Q9P2D1 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CHD7Q9P2D1 TP73-202ENST00000354437 2140 ntTSL 5 BASIC19.79■□□□□ 0.76
CHD7Q9P2D1 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CHD7Q9P2D1 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC19.79■□□□□ 0.76
CHD7Q9P2D1 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CHD7Q9P2D1 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CHD7Q9P2D1 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
CHD7Q9P2D1 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC19.79■□□□□ 0.76
CHD7Q9P2D1 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CHD7Q9P2D1 PWWP2AP1-201ENST00000429776 2273 ntBASIC19.79■□□□□ 0.76
CHD7Q9P2D1 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CHD7Q9P2D1 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC19.79■□□□□ 0.76
CHD7Q9P2D1 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC19.79■□□□□ 0.76
CHD7Q9P2D1 PAM16-208ENST00000573553 722 ntTSL 2 BASIC19.79■□□□□ 0.76
CHD7Q9P2D1 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC19.79■□□□□ 0.76
CHD7Q9P2D1 IGHV3-41-201ENST00000613121 348 ntBASIC19.79■□□□□ 0.76
CHD7Q9P2D1 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CHD7Q9P2D1 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC19.79■□□□□ 0.76
CHD7Q9P2D1 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC19.79■□□□□ 0.76
CHD7Q9P2D1 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CHD7Q9P2D1 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC19.79■□□□□ 0.76
CHD7Q9P2D1 PPOX-214ENST00000535223 664 ntTSL 3 BASIC19.79■□□□□ 0.76
CHD7Q9P2D1 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CHD7Q9P2D1 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC19.78■□□□□ 0.76
CHD7Q9P2D1 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC19.78■□□□□ 0.76
CHD7Q9P2D1 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CHD7Q9P2D1 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CHD7Q9P2D1 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms