Protein–RNA interactions for Protein: Q9D3S3

Snx29, Sorting nexin-29, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx29Q9D3S3 Gm27494-201ENSMUST00000184735 189 ntBASIC17.35■□□□□ 0.37
Snx29Q9D3S3 Gm8396-201ENSMUST00000057361 823 ntBASIC17.35■□□□□ 0.37
Snx29Q9D3S3 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC17.35■□□□□ 0.37
Snx29Q9D3S3 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Snx29Q9D3S3 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Snx29Q9D3S3 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Snx29Q9D3S3 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Snx29Q9D3S3 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
Snx29Q9D3S3 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Snx29Q9D3S3 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Snx29Q9D3S3 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Snx29Q9D3S3 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Snx29Q9D3S3 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Snx29Q9D3S3 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Snx29Q9D3S3 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Snx29Q9D3S3 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Snx29Q9D3S3 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC17.34■□□□□ 0.37
Snx29Q9D3S3 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Snx29Q9D3S3 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Snx29Q9D3S3 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Snx29Q9D3S3 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Snx29Q9D3S3 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Snx29Q9D3S3 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC17.34■□□□□ 0.37
Snx29Q9D3S3 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC17.34■□□□□ 0.37
Snx29Q9D3S3 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Snx29Q9D3S3 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Snx29Q9D3S3 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Snx29Q9D3S3 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC17.34■□□□□ 0.37
Snx29Q9D3S3 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Snx29Q9D3S3 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Snx29Q9D3S3 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Snx29Q9D3S3 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Snx29Q9D3S3 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Snx29Q9D3S3 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
Snx29Q9D3S3 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
Snx29Q9D3S3 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Snx29Q9D3S3 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Snx29Q9D3S3 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.36
Snx29Q9D3S3 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Snx29Q9D3S3 AC119177.1-201ENSMUST00000227647 1332 ntBASIC17.33■□□□□ 0.36
Snx29Q9D3S3 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC17.33■□□□□ 0.36
Snx29Q9D3S3 Gm14701-201ENSMUST00000117156 348 ntBASIC17.33■□□□□ 0.36
Snx29Q9D3S3 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Snx29Q9D3S3 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC17.33■□□□□ 0.36
Snx29Q9D3S3 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Snx29Q9D3S3 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Snx29Q9D3S3 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC17.33■□□□□ 0.36
Snx29Q9D3S3 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Snx29Q9D3S3 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Snx29Q9D3S3 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC17.33■□□□□ 0.36
Snx29Q9D3S3 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Snx29Q9D3S3 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Snx29Q9D3S3 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Snx29Q9D3S3 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Snx29Q9D3S3 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.36
Snx29Q9D3S3 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Snx29Q9D3S3 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Snx29Q9D3S3 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Snx29Q9D3S3 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Snx29Q9D3S3 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Snx29Q9D3S3 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Snx29Q9D3S3 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC17.32■□□□□ 0.36
Snx29Q9D3S3 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Snx29Q9D3S3 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Snx29Q9D3S3 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Snx29Q9D3S3 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Snx29Q9D3S3 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC17.32■□□□□ 0.36
Snx29Q9D3S3 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Snx29Q9D3S3 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC17.32■□□□□ 0.36
Snx29Q9D3S3 Gm5177-201ENSMUST00000183092 997 ntBASIC17.32■□□□□ 0.36
Snx29Q9D3S3 Gm10576-201ENSMUST00000191927 825 ntBASIC17.32■□□□□ 0.36
Snx29Q9D3S3 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC17.32■□□□□ 0.36
Snx29Q9D3S3 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Snx29Q9D3S3 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Snx29Q9D3S3 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Snx29Q9D3S3 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Snx29Q9D3S3 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
Snx29Q9D3S3 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Snx29Q9D3S3 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Snx29Q9D3S3 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Snx29Q9D3S3 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Snx29Q9D3S3 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Snx29Q9D3S3 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Snx29Q9D3S3 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Snx29Q9D3S3 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Snx29Q9D3S3 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Snx29Q9D3S3 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Snx29Q9D3S3 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Snx29Q9D3S3 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC17.31■□□□□ 0.36
Snx29Q9D3S3 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Snx29Q9D3S3 Gm15427-201ENSMUST00000117288 531 ntBASIC17.31■□□□□ 0.36
Snx29Q9D3S3 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC17.31■□□□□ 0.36
Snx29Q9D3S3 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
Snx29Q9D3S3 Auts2-212ENSMUST00000178555 309 ntBASIC17.31■□□□□ 0.36
Snx29Q9D3S3 Gm7286-201ENSMUST00000182691 1007 ntBASIC17.31■□□□□ 0.36
Snx29Q9D3S3 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC17.31■□□□□ 0.36
Snx29Q9D3S3 Gm45612-201ENSMUST00000211320 160 ntBASIC17.31■□□□□ 0.36
Snx29Q9D3S3 Gm45747-201ENSMUST00000212203 999 ntBASIC17.31■□□□□ 0.36
Snx29Q9D3S3 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Snx29Q9D3S3 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms