Protein–RNA interactions for Protein: Q921V7

Slc44a3, Choline transporter-like protein 3, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc44a3Q921V7 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Slc44a3Q921V7 Gm7284-201ENSMUST00000131667 944 ntBASIC15.67■□□□□ 0.1
Slc44a3Q921V7 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Slc44a3Q921V7 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
Slc44a3Q921V7 Mir3081-201ENSMUST00000175305 84 ntBASIC15.67■□□□□ 0.1
Slc44a3Q921V7 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Slc44a3Q921V7 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Slc44a3Q921V7 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Slc44a3Q921V7 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Slc44a3Q921V7 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Slc44a3Q921V7 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
Slc44a3Q921V7 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC15.67■□□□□ 0.1
Slc44a3Q921V7 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Slc44a3Q921V7 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Slc44a3Q921V7 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Slc44a3Q921V7 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Slc44a3Q921V7 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Slc44a3Q921V7 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Slc44a3Q921V7 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Slc44a3Q921V7 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Slc44a3Q921V7 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Slc44a3Q921V7 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Slc44a3Q921V7 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Slc44a3Q921V7 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
Slc44a3Q921V7 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Slc44a3Q921V7 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Slc44a3Q921V7 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Slc44a3Q921V7 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Slc44a3Q921V7 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Slc44a3Q921V7 Gm6257-201ENSMUST00000163864 910 ntBASIC15.66■□□□□ 0.1
Slc44a3Q921V7 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Slc44a3Q921V7 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Slc44a3Q921V7 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Slc44a3Q921V7 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Slc44a3Q921V7 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC15.66■□□□□ 0.1
Slc44a3Q921V7 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Slc44a3Q921V7 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Slc44a3Q921V7 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Slc44a3Q921V7 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Slc44a3Q921V7 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Slc44a3Q921V7 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Slc44a3Q921V7 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Slc44a3Q921V7 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Slc44a3Q921V7 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Slc44a3Q921V7 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Slc44a3Q921V7 AC133083.1-201ENSMUST00000221736 2209 ntBASIC15.66■□□□□ 0.1
Slc44a3Q921V7 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Slc44a3Q921V7 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Slc44a3Q921V7 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Slc44a3Q921V7 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Slc44a3Q921V7 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Slc44a3Q921V7 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Slc44a3Q921V7 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Slc44a3Q921V7 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Slc44a3Q921V7 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Slc44a3Q921V7 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Slc44a3Q921V7 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Slc44a3Q921V7 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC15.65■□□□□ 0.1
Slc44a3Q921V7 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC15.65■□□□□ 0.1
Slc44a3Q921V7 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Slc44a3Q921V7 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC15.65■□□□□ 0.1
Slc44a3Q921V7 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Slc44a3Q921V7 Otx2os1-206ENSMUST00000228153 787 ntBASIC15.65■□□□□ 0.1
Slc44a3Q921V7 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Slc44a3Q921V7 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Slc44a3Q921V7 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Slc44a3Q921V7 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Slc44a3Q921V7 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Slc44a3Q921V7 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Slc44a3Q921V7 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Slc44a3Q921V7 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Slc44a3Q921V7 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC15.65■□□□□ 0.1
Slc44a3Q921V7 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Slc44a3Q921V7 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Slc44a3Q921V7 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Slc44a3Q921V7 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Slc44a3Q921V7 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
Slc44a3Q921V7 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC15.64■□□□□ 0.09
Slc44a3Q921V7 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Slc44a3Q921V7 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Slc44a3Q921V7 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Slc44a3Q921V7 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Slc44a3Q921V7 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Slc44a3Q921V7 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Slc44a3Q921V7 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC15.64■□□□□ 0.09
Slc44a3Q921V7 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
Slc44a3Q921V7 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Slc44a3Q921V7 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC15.64■□□□□ 0.09
Slc44a3Q921V7 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC15.64■□□□□ 0.09
Slc44a3Q921V7 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Slc44a3Q921V7 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Slc44a3Q921V7 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Slc44a3Q921V7 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Slc44a3Q921V7 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Slc44a3Q921V7 Wnt10b-206ENSMUST00000228546 2709 ntBASIC15.64■□□□□ 0.09
Slc44a3Q921V7 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Slc44a3Q921V7 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Slc44a3Q921V7 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Slc44a3Q921V7 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC15.64■□□□□ 0.09
Slc44a3Q921V7 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms