Protein–RNA interactions for Protein: Q8VHP8

Rab40b, Ras-related protein Rab-40B, mousemouse

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab40bQ8VHP8 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC14.29□□□□□ -0.12
Rab40bQ8VHP8 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rab40bQ8VHP8 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC14.29□□□□□ -0.12
Rab40bQ8VHP8 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC14.29□□□□□ -0.12
Rab40bQ8VHP8 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC14.29□□□□□ -0.12
Rab40bQ8VHP8 Gm21814-202ENSMUST00000203277 873 ntBASIC14.29□□□□□ -0.12
Rab40bQ8VHP8 Gm7370-201ENSMUST00000219471 767 ntBASIC14.29□□□□□ -0.12
Rab40bQ8VHP8 CT025689.6-201ENSMUST00000224991 1104 ntBASIC14.29□□□□□ -0.12
Rab40bQ8VHP8 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC14.29□□□□□ -0.12
Rab40bQ8VHP8 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rab40bQ8VHP8 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rab40bQ8VHP8 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rab40bQ8VHP8 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC14.29□□□□□ -0.12
Rab40bQ8VHP8 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rab40bQ8VHP8 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Rab40bQ8VHP8 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Rab40bQ8VHP8 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rab40bQ8VHP8 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rab40bQ8VHP8 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rab40bQ8VHP8 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rab40bQ8VHP8 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Rab40bQ8VHP8 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Rab40bQ8VHP8 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rab40bQ8VHP8 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Rab40bQ8VHP8 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Rab40bQ8VHP8 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rab40bQ8VHP8 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Rab40bQ8VHP8 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rab40bQ8VHP8 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC14.28□□□□□ -0.12
Rab40bQ8VHP8 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rab40bQ8VHP8 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rab40bQ8VHP8 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Rab40bQ8VHP8 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Rab40bQ8VHP8 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Rab40bQ8VHP8 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Rab40bQ8VHP8 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC14.28□□□□□ -0.12
Rab40bQ8VHP8 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rab40bQ8VHP8 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rab40bQ8VHP8 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rab40bQ8VHP8 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Rab40bQ8VHP8 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Rab40bQ8VHP8 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rab40bQ8VHP8 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Rab40bQ8VHP8 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rab40bQ8VHP8 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rab40bQ8VHP8 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rab40bQ8VHP8 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Rab40bQ8VHP8 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rab40bQ8VHP8 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rab40bQ8VHP8 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rab40bQ8VHP8 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Rab40bQ8VHP8 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Rab40bQ8VHP8 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rab40bQ8VHP8 Gm6858-201ENSMUST00000208582 1468 ntBASIC14.27□□□□□ -0.12
Rab40bQ8VHP8 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Rab40bQ8VHP8 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rab40bQ8VHP8 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rab40bQ8VHP8 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rab40bQ8VHP8 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rab40bQ8VHP8 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rab40bQ8VHP8 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rab40bQ8VHP8 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rab40bQ8VHP8 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rab40bQ8VHP8 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC14.27□□□□□ -0.13
Rab40bQ8VHP8 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rab40bQ8VHP8 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rab40bQ8VHP8 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rab40bQ8VHP8 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rab40bQ8VHP8 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rab40bQ8VHP8 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rab40bQ8VHP8 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rab40bQ8VHP8 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rab40bQ8VHP8 AC174678.1-201ENSMUST00000228007 2749 ntBASIC14.27□□□□□ -0.13
Rab40bQ8VHP8 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rab40bQ8VHP8 AC132265.1-201ENSMUST00000219233 1665 ntBASIC14.26□□□□□ -0.13
Rab40bQ8VHP8 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Rab40bQ8VHP8 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Rab40bQ8VHP8 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rab40bQ8VHP8 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rab40bQ8VHP8 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rab40bQ8VHP8 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Rab40bQ8VHP8 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rab40bQ8VHP8 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rab40bQ8VHP8 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rab40bQ8VHP8 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC14.26□□□□□ -0.13
Rab40bQ8VHP8 Gm715-201ENSMUST00000117865 831 ntBASIC14.26□□□□□ -0.13
Rab40bQ8VHP8 Gm13474-201ENSMUST00000122466 815 ntBASIC14.26□□□□□ -0.13
Rab40bQ8VHP8 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Rab40bQ8VHP8 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rab40bQ8VHP8 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rab40bQ8VHP8 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rab40bQ8VHP8 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Rab40bQ8VHP8 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Rab40bQ8VHP8 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Rab40bQ8VHP8 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rab40bQ8VHP8 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rab40bQ8VHP8 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Rab40bQ8VHP8 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Rab40bQ8VHP8 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Rab40bQ8VHP8 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms