Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lysmd4Q8CC84 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Lysmd4Q8CC84 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lysmd4Q8CC84 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Lysmd4Q8CC84 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lysmd4Q8CC84 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lysmd4Q8CC84 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC14.24□□□□□ -0.13
Lysmd4Q8CC84 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
Lysmd4Q8CC84 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lysmd4Q8CC84 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lysmd4Q8CC84 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lysmd4Q8CC84 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lysmd4Q8CC84 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Lysmd4Q8CC84 Spsb2-203ENSMUST00000112473 1322 ntBASIC14.24□□□□□ -0.13
Lysmd4Q8CC84 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Lysmd4Q8CC84 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC14.24□□□□□ -0.13
Lysmd4Q8CC84 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lysmd4Q8CC84 Gm11960-202ENSMUST00000181063 2858 ntBASIC14.24□□□□□ -0.13
Lysmd4Q8CC84 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC14.24□□□□□ -0.13
Lysmd4Q8CC84 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lysmd4Q8CC84 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Lysmd4Q8CC84 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lysmd4Q8CC84 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Lysmd4Q8CC84 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Lysmd4Q8CC84 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lysmd4Q8CC84 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Lysmd4Q8CC84 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lysmd4Q8CC84 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lysmd4Q8CC84 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Lysmd4Q8CC84 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lysmd4Q8CC84 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC14.23□□□□□ -0.13
Lysmd4Q8CC84 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lysmd4Q8CC84 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lysmd4Q8CC84 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lysmd4Q8CC84 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lysmd4Q8CC84 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lysmd4Q8CC84 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
Lysmd4Q8CC84 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lysmd4Q8CC84 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC14.23□□□□□ -0.13
Lysmd4Q8CC84 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Lysmd4Q8CC84 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lysmd4Q8CC84 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC14.23□□□□□ -0.13
Lysmd4Q8CC84 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lysmd4Q8CC84 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lysmd4Q8CC84 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Lysmd4Q8CC84 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Lysmd4Q8CC84 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lysmd4Q8CC84 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
Lysmd4Q8CC84 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lysmd4Q8CC84 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Lysmd4Q8CC84 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lysmd4Q8CC84 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lysmd4Q8CC84 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
Lysmd4Q8CC84 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
Lysmd4Q8CC84 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lysmd4Q8CC84 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Lysmd4Q8CC84 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lysmd4Q8CC84 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lysmd4Q8CC84 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Lysmd4Q8CC84 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lysmd4Q8CC84 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Lysmd4Q8CC84 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lysmd4Q8CC84 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lysmd4Q8CC84 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC14.22□□□□□ -0.13
Lysmd4Q8CC84 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Lysmd4Q8CC84 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC14.22□□□□□ -0.13
Lysmd4Q8CC84 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC14.22□□□□□ -0.13
Lysmd4Q8CC84 Mir5122-201ENSMUST00000175004 89 ntBASIC14.22□□□□□ -0.13
Lysmd4Q8CC84 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lysmd4Q8CC84 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC14.22□□□□□ -0.13
Lysmd4Q8CC84 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lysmd4Q8CC84 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Lysmd4Q8CC84 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lysmd4Q8CC84 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
Lysmd4Q8CC84 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC14.22□□□□□ -0.13
Lysmd4Q8CC84 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lysmd4Q8CC84 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lysmd4Q8CC84 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lysmd4Q8CC84 Ptprs-211ENSMUST00000223859 5588 ntBASIC14.22□□□□□ -0.13
Lysmd4Q8CC84 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Lysmd4Q8CC84 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lysmd4Q8CC84 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Lysmd4Q8CC84 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lysmd4Q8CC84 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Lysmd4Q8CC84 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Lysmd4Q8CC84 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Lysmd4Q8CC84 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Lysmd4Q8CC84 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Lysmd4Q8CC84 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
Lysmd4Q8CC84 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Lysmd4Q8CC84 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Lysmd4Q8CC84 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Lysmd4Q8CC84 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Lysmd4Q8CC84 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC14.21□□□□□ -0.13
Lysmd4Q8CC84 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC14.21□□□□□ -0.13
Lysmd4Q8CC84 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Lysmd4Q8CC84 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC14.21□□□□□ -0.13
Lysmd4Q8CC84 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Lysmd4Q8CC84 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Lysmd4Q8CC84 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms