Protein–RNA interactions for Protein: Q8C0Y0

Ppp4r4, Serine/threonine-protein phosphatase 4 regulatory subunit 4, mousemouse

Predictions only

Length 875 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ppp4r4Q8C0Y0 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ppp4r4Q8C0Y0 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Ppp4r4Q8C0Y0 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ppp4r4Q8C0Y0 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC16.05■□□□□ 0.16
Ppp4r4Q8C0Y0 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ppp4r4Q8C0Y0 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Ppp4r4Q8C0Y0 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
Ppp4r4Q8C0Y0 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC16.05■□□□□ 0.16
Ppp4r4Q8C0Y0 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ppp4r4Q8C0Y0 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC16.05■□□□□ 0.16
Ppp4r4Q8C0Y0 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ppp4r4Q8C0Y0 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ppp4r4Q8C0Y0 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ppp4r4Q8C0Y0 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ppp4r4Q8C0Y0 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Ppp4r4Q8C0Y0 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ppp4r4Q8C0Y0 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ppp4r4Q8C0Y0 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
Ppp4r4Q8C0Y0 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ppp4r4Q8C0Y0 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ppp4r4Q8C0Y0 Gm9889-202ENSMUST00000206983 1577 ntBASIC16.04■□□□□ 0.16
Ppp4r4Q8C0Y0 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ppp4r4Q8C0Y0 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ppp4r4Q8C0Y0 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Ppp4r4Q8C0Y0 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Ppp4r4Q8C0Y0 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC16.04■□□□□ 0.16
Ppp4r4Q8C0Y0 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ppp4r4Q8C0Y0 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ppp4r4Q8C0Y0 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ppp4r4Q8C0Y0 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC16.04■□□□□ 0.16
Ppp4r4Q8C0Y0 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ppp4r4Q8C0Y0 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ppp4r4Q8C0Y0 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
Ppp4r4Q8C0Y0 Gm9103-201ENSMUST00000119371 405 ntBASIC16.04■□□□□ 0.16
Ppp4r4Q8C0Y0 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Ppp4r4Q8C0Y0 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ppp4r4Q8C0Y0 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Ppp4r4Q8C0Y0 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ppp4r4Q8C0Y0 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ppp4r4Q8C0Y0 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ppp4r4Q8C0Y0 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ppp4r4Q8C0Y0 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Ppp4r4Q8C0Y0 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ppp4r4Q8C0Y0 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
Ppp4r4Q8C0Y0 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ppp4r4Q8C0Y0 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ppp4r4Q8C0Y0 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ppp4r4Q8C0Y0 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ppp4r4Q8C0Y0 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Ppp4r4Q8C0Y0 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Ppp4r4Q8C0Y0 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Ppp4r4Q8C0Y0 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Ppp4r4Q8C0Y0 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ppp4r4Q8C0Y0 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ppp4r4Q8C0Y0 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ppp4r4Q8C0Y0 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ppp4r4Q8C0Y0 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Ppp4r4Q8C0Y0 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ppp4r4Q8C0Y0 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Ppp4r4Q8C0Y0 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ppp4r4Q8C0Y0 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ppp4r4Q8C0Y0 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ppp4r4Q8C0Y0 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ppp4r4Q8C0Y0 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ppp4r4Q8C0Y0 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ppp4r4Q8C0Y0 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Ppp4r4Q8C0Y0 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Ppp4r4Q8C0Y0 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ppp4r4Q8C0Y0 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Ppp4r4Q8C0Y0 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ppp4r4Q8C0Y0 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ppp4r4Q8C0Y0 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Ppp4r4Q8C0Y0 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ppp4r4Q8C0Y0 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ppp4r4Q8C0Y0 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
Ppp4r4Q8C0Y0 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC16.02■□□□□ 0.16
Ppp4r4Q8C0Y0 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC16.02■□□□□ 0.16
Ppp4r4Q8C0Y0 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Ppp4r4Q8C0Y0 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ppp4r4Q8C0Y0 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ppp4r4Q8C0Y0 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ppp4r4Q8C0Y0 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Ppp4r4Q8C0Y0 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ppp4r4Q8C0Y0 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ppp4r4Q8C0Y0 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC16.02■□□□□ 0.15
Ppp4r4Q8C0Y0 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ppp4r4Q8C0Y0 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ppp4r4Q8C0Y0 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ppp4r4Q8C0Y0 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC16.02■□□□□ 0.15
Ppp4r4Q8C0Y0 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Ppp4r4Q8C0Y0 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ppp4r4Q8C0Y0 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Ppp4r4Q8C0Y0 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Ppp4r4Q8C0Y0 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Ppp4r4Q8C0Y0 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ppp4r4Q8C0Y0 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ppp4r4Q8C0Y0 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ppp4r4Q8C0Y0 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ppp4r4Q8C0Y0 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Ppp4r4Q8C0Y0 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC16.01■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms