Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Chd4Q6PDQ2 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Chd4Q6PDQ2 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Chd4Q6PDQ2 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Chd4Q6PDQ2 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Chd4Q6PDQ2 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Chd4Q6PDQ2 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Chd4Q6PDQ2 Gm15920-201ENSMUST00000118998 402 ntBASIC20.53■□□□□ 0.88
Chd4Q6PDQ2 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC20.53■□□□□ 0.88
Chd4Q6PDQ2 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Chd4Q6PDQ2 Gm10499-201ENSMUST00000174094 934 ntBASIC20.53■□□□□ 0.88
Chd4Q6PDQ2 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Chd4Q6PDQ2 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC20.53■□□□□ 0.88
Chd4Q6PDQ2 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Chd4Q6PDQ2 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Chd4Q6PDQ2 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Chd4Q6PDQ2 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC20.52■□□□□ 0.88
Chd4Q6PDQ2 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Chd4Q6PDQ2 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Chd4Q6PDQ2 Gm6226-201ENSMUST00000117765 1146 ntBASIC20.52■□□□□ 0.88
Chd4Q6PDQ2 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC20.52■□□□□ 0.88
Chd4Q6PDQ2 Gm25948-201ENSMUST00000175334 112 ntBASIC20.52■□□□□ 0.88
Chd4Q6PDQ2 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC20.52■□□□□ 0.88
Chd4Q6PDQ2 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC20.52■□□□□ 0.88
Chd4Q6PDQ2 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Chd4Q6PDQ2 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC20.52■□□□□ 0.88
Chd4Q6PDQ2 Gm10154-201ENSMUST00000084445 354 ntBASIC20.52■□□□□ 0.88
Chd4Q6PDQ2 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Chd4Q6PDQ2 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Chd4Q6PDQ2 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Chd4Q6PDQ2 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Chd4Q6PDQ2 Gm45293-201ENSMUST00000209754 1812 ntBASIC20.52■□□□□ 0.88
Chd4Q6PDQ2 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Chd4Q6PDQ2 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Chd4Q6PDQ2 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Chd4Q6PDQ2 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC20.51■□□□□ 0.87
Chd4Q6PDQ2 Gm44872-201ENSMUST00000207864 420 ntBASIC20.51■□□□□ 0.87
Chd4Q6PDQ2 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Chd4Q6PDQ2 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Chd4Q6PDQ2 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Chd4Q6PDQ2 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Chd4Q6PDQ2 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Chd4Q6PDQ2 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Chd4Q6PDQ2 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Chd4Q6PDQ2 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Chd4Q6PDQ2 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Chd4Q6PDQ2 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Chd4Q6PDQ2 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC20.51■□□□□ 0.87
Chd4Q6PDQ2 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC20.51■□□□□ 0.87
Chd4Q6PDQ2 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Chd4Q6PDQ2 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Chd4Q6PDQ2 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Chd4Q6PDQ2 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Chd4Q6PDQ2 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Chd4Q6PDQ2 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Chd4Q6PDQ2 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC20.5■□□□□ 0.87
Chd4Q6PDQ2 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Chd4Q6PDQ2 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Chd4Q6PDQ2 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Chd4Q6PDQ2 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Chd4Q6PDQ2 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Chd4Q6PDQ2 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Chd4Q6PDQ2 Gm27321-201ENSMUST00000185021 205 ntBASIC20.5■□□□□ 0.87
Chd4Q6PDQ2 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Chd4Q6PDQ2 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Chd4Q6PDQ2 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Chd4Q6PDQ2 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC20.5■□□□□ 0.87
Chd4Q6PDQ2 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Chd4Q6PDQ2 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Chd4Q6PDQ2 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Chd4Q6PDQ2 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC20.49■□□□□ 0.87
Chd4Q6PDQ2 AC151836.1-202ENSMUST00000226259 753 ntBASIC20.49■□□□□ 0.87
Chd4Q6PDQ2 Nudt18-203ENSMUST00000228768 1578 ntBASIC20.49■□□□□ 0.87
Chd4Q6PDQ2 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Chd4Q6PDQ2 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Chd4Q6PDQ2 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Chd4Q6PDQ2 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Chd4Q6PDQ2 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Chd4Q6PDQ2 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
Chd4Q6PDQ2 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC20.49■□□□□ 0.87
Chd4Q6PDQ2 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Chd4Q6PDQ2 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
Chd4Q6PDQ2 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Chd4Q6PDQ2 AC166341.4-201ENSMUST00000220625 123 ntBASIC20.49■□□□□ 0.87
Chd4Q6PDQ2 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC20.49■□□□□ 0.87
Chd4Q6PDQ2 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Chd4Q6PDQ2 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Chd4Q6PDQ2 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC20.49■□□□□ 0.87
Chd4Q6PDQ2 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Chd4Q6PDQ2 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Chd4Q6PDQ2 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Chd4Q6PDQ2 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Chd4Q6PDQ2 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Chd4Q6PDQ2 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Chd4Q6PDQ2 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Chd4Q6PDQ2 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
Chd4Q6PDQ2 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC20.47■□□□□ 0.87
Chd4Q6PDQ2 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Chd4Q6PDQ2 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC20.47■□□□□ 0.87
Chd4Q6PDQ2 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 52.8 ms