Protein–RNA interactions for Protein: Q6ICC9

RTL6, Retrotransposon Gag-like protein 6, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL6Q6ICC9 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RTL6Q6ICC9 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
RTL6Q6ICC9 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
RTL6Q6ICC9 GOLGA6L5P-202ENST00000515341 1828 ntBASIC16.89■□□□□ 0.29
RTL6Q6ICC9 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC16.89■□□□□ 0.29
RTL6Q6ICC9 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC16.88■□□□□ 0.29
RTL6Q6ICC9 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC16.88■□□□□ 0.29
RTL6Q6ICC9 AP000974.1-201ENST00000623909 2387 ntBASIC16.88■□□□□ 0.29
RTL6Q6ICC9 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RTL6Q6ICC9 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RTL6Q6ICC9 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC16.88■□□□□ 0.29
RTL6Q6ICC9 GAS2L1P1-201ENST00000420145 1480 ntBASIC16.88■□□□□ 0.29
RTL6Q6ICC9 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
RTL6Q6ICC9 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RTL6Q6ICC9 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC16.88■□□□□ 0.29
RTL6Q6ICC9 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RTL6Q6ICC9 STARP1-201ENST00000397973 869 ntBASIC16.88■□□□□ 0.29
RTL6Q6ICC9 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RTL6Q6ICC9 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC16.88■□□□□ 0.29
RTL6Q6ICC9 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC16.88■□□□□ 0.29
RTL6Q6ICC9 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC16.88■□□□□ 0.29
RTL6Q6ICC9 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC16.88■□□□□ 0.29
RTL6Q6ICC9 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC16.88■□□□□ 0.29
RTL6Q6ICC9 METTL23-204ENST00000586752 904 ntTSL 2 BASIC16.88■□□□□ 0.29
RTL6Q6ICC9 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC16.88■□□□□ 0.29
RTL6Q6ICC9 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
RTL6Q6ICC9 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RTL6Q6ICC9 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RTL6Q6ICC9 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RTL6Q6ICC9 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC16.88■□□□□ 0.29
RTL6Q6ICC9 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RTL6Q6ICC9 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
RTL6Q6ICC9 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC16.88■□□□□ 0.29
RTL6Q6ICC9 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RTL6Q6ICC9 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RTL6Q6ICC9 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
RTL6Q6ICC9 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RTL6Q6ICC9 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RTL6Q6ICC9 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
RTL6Q6ICC9 GPAT2P1-201ENST00000444924 1672 ntBASIC16.88■□□□□ 0.29
RTL6Q6ICC9 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC16.88■□□□□ 0.29
RTL6Q6ICC9 AC090340.1-201ENST00000620778 4980 ntBASIC16.87■□□□□ 0.29
RTL6Q6ICC9 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RTL6Q6ICC9 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC16.87■□□□□ 0.29
RTL6Q6ICC9 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC16.87■□□□□ 0.29
RTL6Q6ICC9 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC16.87■□□□□ 0.29
RTL6Q6ICC9 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC16.87■□□□□ 0.29
RTL6Q6ICC9 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
RTL6Q6ICC9 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC16.87■□□□□ 0.29
RTL6Q6ICC9 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC16.87■□□□□ 0.29
RTL6Q6ICC9 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC16.87■□□□□ 0.29
RTL6Q6ICC9 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RTL6Q6ICC9 SPDYE15P-201ENST00000424157 909 ntBASIC16.87■□□□□ 0.29
RTL6Q6ICC9 DAP-202ENST00000432074 1048 ntTSL 2 BASIC16.87■□□□□ 0.29
RTL6Q6ICC9 CD81-212ENST00000526072 1172 ntTSL 5 BASIC16.87■□□□□ 0.29
RTL6Q6ICC9 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
RTL6Q6ICC9 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC16.87■□□□□ 0.29
RTL6Q6ICC9 AC083849.1-201ENST00000615227 514 ntBASIC16.87■□□□□ 0.29
RTL6Q6ICC9 AC116407.4-201ENST00000623319 1061 ntBASIC16.87■□□□□ 0.29
RTL6Q6ICC9 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RTL6Q6ICC9 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RTL6Q6ICC9 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC16.87■□□□□ 0.29
RTL6Q6ICC9 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC16.87■□□□□ 0.29
RTL6Q6ICC9 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RTL6Q6ICC9 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC16.87■□□□□ 0.29
RTL6Q6ICC9 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RTL6Q6ICC9 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
RTL6Q6ICC9 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC16.87■□□□□ 0.29
RTL6Q6ICC9 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RTL6Q6ICC9 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RTL6Q6ICC9 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC16.87■□□□□ 0.29
RTL6Q6ICC9 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC16.87■□□□□ 0.29
RTL6Q6ICC9 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
RTL6Q6ICC9 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC16.87■□□□□ 0.29
RTL6Q6ICC9 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC16.86■□□□□ 0.29
RTL6Q6ICC9 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
RTL6Q6ICC9 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC16.86■□□□□ 0.29
RTL6Q6ICC9 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC16.86■□□□□ 0.29
RTL6Q6ICC9 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC16.86■□□□□ 0.29
RTL6Q6ICC9 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RTL6Q6ICC9 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RTL6Q6ICC9 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RTL6Q6ICC9 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RTL6Q6ICC9 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC16.86■□□□□ 0.29
RTL6Q6ICC9 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RTL6Q6ICC9 GAD2-202ENST00000376248 680 ntTSL 5 BASIC16.86■□□□□ 0.29
RTL6Q6ICC9 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC16.86■□□□□ 0.29
RTL6Q6ICC9 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
RTL6Q6ICC9 PTK2-216ENST00000519881 863 ntTSL 3 BASIC16.86■□□□□ 0.29
RTL6Q6ICC9 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC16.86■□□□□ 0.29
RTL6Q6ICC9 AL136038.3-201ENST00000561909 1096 ntBASIC16.86■□□□□ 0.29
RTL6Q6ICC9 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC16.86■□□□□ 0.29
RTL6Q6ICC9 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC16.86■□□□□ 0.29
RTL6Q6ICC9 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RTL6Q6ICC9 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC16.86■□□□□ 0.29
RTL6Q6ICC9 PWWP2AP1-201ENST00000429776 2273 ntBASIC16.86■□□□□ 0.29
RTL6Q6ICC9 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RTL6Q6ICC9 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
RTL6Q6ICC9 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RTL6Q6ICC9 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms